Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04861 ATGGAAGAAACATTTGTACCTCTTGAAGGTATCAAGAATGATCTAAAAGGAAGGTTAATGTGCTATAAGCAAGATTGGACAAGTGGAATCAAAGCAGGTGTAAGGATTTGGGCCCCCACAACATACATATTTTTTGCTTCTGCAATACCTGTTATTTCATTTGGTGAACAGCTAGAGAGAAATACTGAGGGTGTTCTAACAGCTGTTCAAACCTTAGCTGCAACTTCAATATGTGGCATTATACACTCCATCATTGGTGGTCAACCTTTGTTGATTTTAGGAGTGGCAGAACCTACTGTGATCATGTACACATTCATGTTCAATTTTGCTAAAGAAAGACCTGAGTTGGGTAGGAATCTGTTTCTTGGATGGGCTGGATGGGTATGTGTTTGGACTGCATTGATACTATTCTTACTGGCAATATTAGGAGCATGTTCCATCATCAACAGATTTACCCGAATTGCAGGCGAGTTGTTTGGCATGCTTATTGCAATGCTTTTCATGCAGCAAGCTATCAAAGGGCTCGTGGATGAGTTTCGCATACCAAAGAGAGAAGATACAAAATCAGTTGAATTTTTACCTTCATGGAGGTTTGCTAATGGGATGTTTGCTTTGGTCCTTTCATTTGGCCTTCTTCTCACTGCATTGAAAAGCCGAAAGGCTAGATCATGGCGTTATGGGAGTGGTTGGCTTCGCAGCCTTATAGCCGACTATGGTGTGCCGCTTATGGTCCTAGTTTGGACAGGTGTATCCTACATACCAACTTCAAGTGTTCCACATGGTATCCCAAGACGCCTATTTAGTCCAAACCCATGGTCGCCCGGTGCCTATGACAATTGGACTGTTGTTAAGGATATGGGTAATGTTCCTGTTGTCTTCATAATCGGAGCATTTATCCCAGCAACTATGATTGCTGTGCTTTATTACTTTGATCACAGTGTTGCATCTCAGCTTTCTCAGCAGAAAGAGTTCAATTTGAAAAAGCCGGCATCGTACCATTATGATTTGCTCCTTTTAGGATTTTTGACATTATTGTGTGGCCTTATTGGAATCCCTCCTGCGAATGGAGTCATACCGCAGTCTCCAATGCATACGAAGAGTCTAGCAACTCTTAAACATCAATTGCTTCGTAACAGACTCGTGATATCCGCTCGGAAAAGTATCAGTAAAAATGCTAGTTTAGGACAGTTATATGGTAATATGCAAGAAGCATATCATCAAATGCAGACACCTCTTATTTACCAAGACCCTTCTGCTCGACCACAAGGACTAAAAGAATTAAAAGAAACAACCATTCAAGCAGCTACAAGTTTGGGAAACGTGGACGCACCTGTCGATGAGACTATATTTGATGTCGAGAAAGAAATAGATGACTTGCTTCCTGTCGAGGTAAAGGAACAACGTGTTAGTAACTTGCTTCAATCGGTAATGGTCGGAGGATGTGTTGCAGCCATGCCTATTCTCAAGAAAATCCCAACTTCAGTACTTTGGGGCTATTTCGCTTTCATGGCAATTGAAAGTTTACCTGGAAACCAGTTTTGGGAAAGGATCTTGTTACTCTTCACTGCACCAAGCAGAAGATACAAGGTGCTTGAAGATTACCATGCTACTTTTGTCGAAACAGTTCCTTTTAAGACAATAGCAACATTCACAATTTTCCAAACCATTTATCTACTTATATGTTTTGGACTAACTTGGGTACCTATTGCTGGAGTCATGTTTCCTTTGATGATCATGCTCTTAGTTCCGTTACGACAGTACTTTCTCCCTAAATTTTTCAAAGGTGTACATCTTCAAGACTTGGATGCAGCTGAATATGAGGAACAAACTGCTTTACCATTCAACATTGCAGCTCAATCGGAGTTTGGAGCCGGTGCTTCTCATATTGGAGAAGGTGAGATATTTGATGAAGTTCTCACTAGAAGCCGTGGCGAATTCAGGCATACTACTTCCAGTCCAAAAATCAATAGCTCCACACCAACACCAAGAAATGATCCTCAAAGCCGACTTAGCCCGCATCTCTCCTTTAATTCTCGTGTGGGCGAGTTTACAACGGAACAAAGTCCTCGGTCCGGAACAAGAGGCCCCAACAGTCCAATTGCTAGAGAAATGAGATTGCCAACTAGGGGAGTAAGTCCTCTCAAACCTGATTCAAAACAGCAGGACAAAAAATAA 2175 0.4166 MEETFVPLEGIKNDLKGRLMCYKQDWTSGIKAGVRIWAPTTYIFFASAIPVISFGEQLERNTEGVLTAVQTLAATSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLGWAGWVCVWTALILFLLAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPKREDTKSVEFLPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGVSYIPTSSVPHGIPRRLFSPNPWSPGAYDNWTVVKDMGNVPVVFIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLKKPASYHYDLLLLGFLTLLCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRNRLVISARKSISKNASLGQLYGNMQEAYHQMQTPLIYQDPSARPQGLKELKETTIQAATSLGNVDAPVDETIFDVEKEIDDLLPVEVKEQRVSNLLQSVMVGGCVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPLRQYFLPKFFKGVHLQDLDAAEYEEQTALPFNIAAQSEFGAGASHIGEGEIFDEVLTRSRGEFRHTTSSPKINSSTPTPRNDPQSRLSPHLSFNSRVGEFTTEQSPRSGTRGPNSPIAREMRLPTRGVSPLKPDSKQQDKK 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04861 724 PANTHER ANION EXCHANGE PROTEIN 2 610 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trre13g04861 724 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016020
Trre13g04861 724 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016020
Trre13g04861 724 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016020
Trre13g04861 724 MobiDBLite consensus disorder prediction 646 724 - -
Trre13g04861 724 MobiDBLite consensus disorder prediction 649 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04861 Trre-Chr13 55114099 55117920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04861 1 697 Antiporters AT3G62270 81.455 0.0 1157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04861 K24194 - gmx:100776705 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04861 13 55114099 55117920 Trre13g04861 13 55114099 55117920 ECH