Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04831 ATGGATAGTTCAAATAATATGGTGGATTCTGGTGGTATTCTTCATGAATTTATAGAAGTTGACAAGTTTAAAGATGATGGTGTCGGCGTAGCATGTTGGGAGCCTGAAATGGATATGTGTTTTTCTTCTATGGATGATGCTAAATCTTTTTATGCAGAGTATGCTTTGAGAAAGGGATTTGGGTGGAGGATTAGATCATCAAAAAAAGGACCGGATGGAGAAATATGCTACATTATTCTAGCATGCTCAAGAGAGGGATCTAATGTCTCAAAGGTTCCACCTACATTGAAGACACTTCTGACAAGGGTGAACCACTGTCCTGCTAAGATTTGTATTAAGATGGAAAAAGATGGATTGTGGTACTTCAAAAAATTTAATCCCGACCATTCTCACGAGATCATCCCTACAAAGGCAAGGTTGTTCAAGGCTAGCAAGAAAACGAAGAGGACTATTGAAATCAATGATGATGCGGGAGAGCATGAAAATATATTGCTTTGTGGAAGAGGCGTGGAGAATTATGTTAACCAGGAACGTCGTGCAATTGGAAAAGAAGCCACTAGCCACCGCCATATTTGGGTTCATGTAACTGTCATCAAATCCTTCATCATAAATTTTGGTGTGACACTTGCACCTAAAATTTAA 642 0.3894 MDSSNNMVDSGGILHEFIEVDKFKDDGVGVACWEPEMDMCFSSMDDAKSFYAEYALRKGFGWRIRSSKKGPDGEICYIILACSREGSNVSKVPPTLKTLLTRVNHCPAKICIKMEKDGLWYFKKFNPDHSHEIIPTKARLFKASKKTKRTIEINDDAGEHENILLCGRGVENYVNQERRAIGKEATSHRHIWVHVTVIKSFIINFGVTLAPKI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04831 213 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 177 - -
Trre13g04831 213 Pfam FAR1 DNA-binding domain 49 134 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04831 Trre-Chr13 54907472 54912663 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre13g04831 FAR1 5.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04831 - - cam:101513893 224.172