Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04765 ATGCATGAAAAAAAGAACAAGACATTATGGAATTCTAGAGGGTGGCACTATGGTAATTTTAGAAATGGTAGATTACCTTTGAAGATGTCAGATCGTACTAGAGCCATTTATGATTCATCAAGAGGCAGAGGAAAAACACATGATGATGATCATGATGATGATGATGATGATGAAGGTGGTGTTTTGGTTAGGGACATTGTTGTTGTTAGTAAAGATGGGAGTGGAAACTTTACAACTATCAATGATGCTGTTGCTGCTGCTCCAAATAACACTATTAATGCAACAAATGGATATTTCTTGATTTTTATCAAAGAAGGTGTTTATGAAGAATATGTGTCTATCCCTCAAAACAAGGCATATTTGATGATGATCGGAGACGGAATCAATCAAACAGTTATCACCGGCAACCACAGTGTTGGTGACGGATGGACAACTTTTAATTCCCCAACATTTGCTGTGGTAGCACCGGGGTTTGTAGCGGTTAACATAACATTTCGGAACACCGCTGGACCGAGCAAATTCCAAGCAGTTGCAATGAGAAGTGGAGCAGACATGTCGACTTTCTATCGTTGCAGCTTTGAAGGGTACCAAGATACTCTCTATACACATTCACTAAGACAATTTTATAAAGAATGCGATTTATATGGAACAATTGATTTCATATTTGGAAACGCCGCAGTTGTTTTGCAAAACTGCAACATATATCCTCGTCTTCCTTTACCGGGACAGTTCAACCCGATTACTGCTCAAGGACGAACCGATCCAAATCAAAACACTGGTATTTCCATTCACAATTGCACTATTAAATCAGCTGAAGATTTAGTTCCAAGTGTTGGCATTGTGAAAACTTACCTTGGGAGACCATGGAAAGAATATTCAAGAACTGTTGTTATGCAATCTTTCTTGGATAATTTGATAGAACCAAGTGGTTGGTCTATATGGAGTGGTGATTTTGCACTCTCTACTTTGTATTATGCAGAGTATGATAATAGAGGACCAGGTGCAAATACTTCCAATAGAGTTACATGGCAAGGGTACCATGTGATTAATGCTACTGATGCTGCTAATTTTACAGTTGATAATTTTCTGCATGGGAATGATTGGTTGCCTCAAATTGGAGTTCCTTATATTAATTGA 1137 0.3817 MHEKKNKTLWNSRGWHYGNFRNGRLPLKMSDRTRAIYDSSRGRGKTHDDDHDDDDDDEGGVLVRDIVVVSKDGSGNFTTINDAVAAAPNNTINATNGYFLIFIKEGVYEEYVSIPQNKAYLMMIGDGINQTVITGNHSVGDGWTTFNSPTFAVVAPGFVAVNITFRNTAGPSKFQAVAMRSGADMSTFYRCSFEGYQDTLYTHSLRQFYKECDLYGTIDFIFGNAAVVLQNCNIYPRLPLPGQFNPITAQGRTDPNQNTGISIHNCTIKSAEDLVPSVGIVKTYLGRPWKEYSRTVVMQSFLDNLIEPSGWSIWSGDFALSTLYYAEYDNRGPGANTSNRVTWQGYHVINATDAANFTVDNFLHGNDWLPQIGVPYIN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04765 378 FunFam Pectinesterase 61 378 - -
Trre13g04765 378 SUPERFAMILY Pectin lyase-like 64 377 IPR011050 -
Trre13g04765 378 PANTHER PECTINESTERASE 66 370 - -
Trre13g04765 378 MobiDBLite consensus disorder prediction 38 59 - -
Trre13g04765 378 Pfam Pectinesterase 67 366 IPR000070 GO:0030599|GO:0042545
Trre13g04765 378 Gene3D - 62 378 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04765 Trre-Chr13 54399107 54400663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04765 17 378 Carbohydrate Esterase AT4G02330 68.785 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04765 K01051 - gmx:100813051 590.497