Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04764 ATGACCGTGGCTAATTCCAATTTAACGATAAATAATGATCTTATTAGCCAACTCTCTAATGATAACAAACTCCATAGTGTTTCACTTGCTTTGTTCACAAAGGGTTGGATGCATGAAAAAAAGAACAAGACATTATGGAATTCTAGAGGGTGGCACTATGGTAATTTTAGAAATGGTAGATTACCTTTGAAGATGTCAGATCGTACTAGAGCCATTTATGATTCATCAAGAGGCAGAGGAAAAACACATGATGATGATCATGATGATGATGATGATGATGAAGGTGGTGTTTTGGTTAGGGACATTGTTGTTGTTAGTAAAGATGGGAGTGGAAACTTTACAACTATCAATGATGCTGTTGCTGCTGCTCCAAATAACACTATTAATGCAACAAATGGATATTTCTTGATTTTTATCAAAGAAGGTGTTTATGAAGAATATGTGTCTATCCCTCAAAACAAGGCATATTTGATGATGATCGGAGACGGAATCAATCAAACAGTTATCACCGGCAACCACAGTGTTGGTGACGGATGGACAACTTTTAATTCCCCAACATTTGCTGTGGTAGCACCGGGGTTTGTAGCGGTTAACATAACATTTCGGAACACCGCTGGACCGAGCAAATTCCAAGCAGTTGCAATGAGAAGTGGAGCAGACATGTCGACTTTCTATCGTTGCAGCTTTGAAGGGTACCAAGATACTCTCTATACACATTCACTAAGACAATTTTATAAAGAATGCGATTTATATGGAACAATTGATTTCATATTTGGAAACGCCGCAGTTGTTTTGCAAAACTGCAACATATATCCTCGTCTTCCTTTACCGGGACAGTTCAACCCGATTACTGCTCAAGGACGAACCGATCCAAATCAAAACACTGGTATTTCCATTCACAATTGCACTATTAAATCAGCTGAAGATTTAGTTCCAAGTGTTGGCATTGTGAAAACTTACCTTGGGAGACCATGGAAAGAATATTCAAGAACTGTTGTTATGCAATCTTTCTTGGATAATTTGATAGAACCAAGTGGTTGGTCTATATGGAGTGGTGATTTTGCACTCTCTACTTTGTATTATGCAGAGTATGATAATAGAGGACCAGGTGCAAATACTTCCAATAGAGTTACATGGCAAGGGTACCATGTGATTAATGCTACTGATGCTGCTAATTTTACAGTTGATAATTTTCTGCATGGGAATGATTGGTTGCCTCAAATTGGAGTTCCTTATATTAATTGA 1245 0.3791 MTVANSNLTINNDLISQLSNDNKLHSVSLALFTKGWMHEKKNKTLWNSRGWHYGNFRNGRLPLKMSDRTRAIYDSSRGRGKTHDDDHDDDDDDEGGVLVRDIVVVSKDGSGNFTTINDAVAAAPNNTINATNGYFLIFIKEGVYEEYVSIPQNKAYLMMIGDGINQTVITGNHSVGDGWTTFNSPTFAVVAPGFVAVNITFRNTAGPSKFQAVAMRSGADMSTFYRCSFEGYQDTLYTHSLRQFYKECDLYGTIDFIFGNAAVVLQNCNIYPRLPLPGQFNPITAQGRTDPNQNTGISIHNCTIKSAEDLVPSVGIVKTYLGRPWKEYSRTVVMQSFLDNLIEPSGWSIWSGDFALSTLYYAEYDNRGPGANTSNRVTWQGYHVINATDAANFTVDNFLHGNDWLPQIGVPYIN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04764 414 MobiDBLite consensus disorder prediction 74 95 - -
Trre13g04764 414 FunFam Pectinesterase 97 414 - -
Trre13g04764 414 SUPERFAMILY Pectin lyase-like 100 413 IPR011050 -
Trre13g04764 414 Gene3D - 98 414 IPR012334 -
Trre13g04764 414 Pfam Pectinesterase 103 402 IPR000070 GO:0030599|GO:0042545
Trre13g04764 414 PANTHER PECTINESTERASE 17 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04764 Trre-Chr13 54399107 54400771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04764 2 414 Carbohydrate Esterase AT4G02330 65.166 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04764 K01051 - gmx:100813051 634.024