Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04760 ATGGCTTCTGACCCAAACCTTGAAACAAAGTATGAACTTAACGCCAAAGTCATGGTAGGCTCTTCCGTCCTTCTCTTCATACTCATAATCATCGTTGTTCTCTTTCGCACTTACGTCTACCTCTGCCACCATCGTCGCCACCGTCAATTCTCTCAACAATCTCTTACAACCACCACTTTCAAAGAAGAACCTCTTAACCCTTCCGTTCTAAAATCCATTCCTACTTTTATGTTTTCATCCTCTGCAAGCCACCGTACTCTCCACGACTGTGCTGTCTGCTTGTCGGAGTTCACCGACGGCGATGTGTGCCAGCTCCGGTTCAACCGGCAACGTGTGCTGTTTCGGGTTCAGAAGAACCGGGTGAAGGTTGTTCGAATTTTCTTGAACCGGTTGGGTGTCCGAGAAAGCCGTTTAGTGTAA 420 0.4762 MASDPNLETKYELNAKVMVGSSVLLFILIIIVVLFRTYVYLCHHRRHRQFSQQSLTTTTFKEEPLNPSVLKSIPTFMFSSSASHRTLHDCAVCLSEFTDGDVCQLRFNRQRVLFRVQKNRVKVVRIFLNRLGVRESRLV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04760 139 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 22 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04760 Trre-Chr13 54356068 54356572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04760 11 110 Rapid Response to Elicitors AT3G16720 30.769 7.11e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04760 - - cam:101488632 124.79