Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04743 ATGATTATAACATTACGCCTTATTTTACTAGCCATTTTTCTTTCATTCTCAACAAATACTAGCCAAATTGCATATGCAAAAAGAAACTATAGCAATAATGTTAAGGAAGCTTGCAGTGTCACAAGGTACAAAAATCTTTGCATTCACACACTATCACAATTCTCCAACTCAGCAGGAAGAACCCCGAGCAAATGGGCACGCGCGGGAGTGTCAGTAACAATAGGCGAAGTTAAGAATGTTCAAGCATATCTTACAAATTTAAAGAGGAATGGGAATTTGAAAGGAAGAAACAAAGTTGCGCTTTCGGATTGTATCGAAACTTTTGGCTATGCACTTGATGATCTTCACAAATCGCTCGGTGTGCTTAGGAAGCTAAACAAACACACGTTTAGTACGCAAATGGGGGATCTTAATACATGGATTAGCGCGGCACTTACCGATGAAGATACTTGTCTTGATGGATTTGAAGGAAAAAGTGGAAAACAAATTAAATTACTGCAAAATAAGGTTCATAATGTTTCTTATCTAACAAGCAACGCTCTAGCTCTTGTCAACAAACTTGCTTCTACGGGTCTCAGAAGCATCACTGACCCGTAG 597 0.3853 MIITLRLILLAIFLSFSTNTSQIAYAKRNYSNNVKEACSVTRYKNLCIHTLSQFSNSAGRTPSKWARAGVSVTIGEVKNVQAYLTNLKRNGNLKGRNKVALSDCIETFGYALDDLHKSLGVLRKLNKHTFSTQMGDLNTWISAALTDEDTCLDGFEGKSGKQIKLLQNKVHNVSYLTSNALALVNKLASTGLRSITDP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04743 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 189 IPR035513 -
Trre13g04743 198 CDD PMEI-like_3 37 189 - -
Trre13g04743 198 FunFam Pectinesterase inhibitor 3 29 188 - -
Trre13g04743 198 SMART PMEI_2 29 183 IPR006501 GO:0004857
Trre13g04743 198 NCBIfam pectinesterase inhibitor domain 5 187 IPR006501 GO:0004857
Trre13g04743 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 183 - -
Trre13g04743 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 188 IPR035513 -
Trre13g04743 198 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04743 Trre-Chr13 54245955 54246551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04743 34 192 Carbohydrate Esterase AT3G14310 34.756 1.33e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04743 - - gmx:100791264 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04743 13 54245955 54246551 Trre13g04743 13 54245955 54246551 ECH