Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04705 ATGTTCTCTAGGTCAGCTGCAACTCTTGCAATGTTTGTCCACGGACAAGTAGGCTACAGGATTCCTGAAGTAGAGGAAGATTATCAATTACAATTGGCTTTGGAGATGAGTGCAAAGGAGGATACTGAAGCTGTGCAGATTGAGGCTCTTAAGAAGATTAGTTTAGGATCTTGTGCTCCTGATGATACACGAGCTGAAATTGTGGCATACAGATACTGGGTGAGTTACTTTGTTCATTTTAAGCACATTGACTTTAGGTTGAAGTCACATATTTGTTATGTGGTTATGCCAGAAGTGAAGATATTGGAACATGGAAGATATAAGTTTCATGTTTGA 336 0.3929 MFSRSAATLAMFVHGQVGYRIPEVEEDYQLQLALEMSAKEDTEAVQIEALKKISLGSCAPDDTRAEIVAYRYWVSYFVHFKHIDFRLKSHICYVVMPEVKILEHGRYKFHV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04705 111 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 25 44 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04705 Trre-Chr13 54093455 54094411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04705 14 73 MAP Kinase Kinase Kinase AT1G73660 61.667 7.65e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04705 - - mnt:21400389 92.0485