Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04699 ATGGAGCTCTGGAACGACGGTTTATCGGAGCTGGAGATTGGGACTTCCGTCGAGTCATTCCAGAAGTTTCTAGGTTCTCAACGAGAACTCTTACATAGCCAGATCGATCAGTTTCAGGAAATCGTCGTCACACAATGCAAACTCACCGGTGTCAATCCTCTCTCTCAAGAAATGGCTGCTGGTGCTTTGTCAATAAAAATCGGAAAAAGACCCAGGGATTTATTAAATCCAAAGGCTGTAAATTACATGCAATCAGTTTTTTCTATTAAAGATGCAATTAGCAAGAAAGAATCTCGCGAGATCAGTGCTTTATTTGGTGTAACAGTAACACAGGTGCGCGACTATTTCACTAGCCAGCGTTCAAGGGTGAGGAAACAAGTTCAGTTGTCGAAGGAGAGGACATTAAAATCTAATACTTGTGCAGAATCTCTTGATGCGCAAATAAACTCGGATCCCATGACATCAATGAATCCAGCTCCCTTAAACTCTGTCGGTGCCACCAACATGGAACAAGCATCCTATTCCGTTCAGGAAGCAGCTCTTTCTGACCTAGATGACTCGGATAAACAATTTGTTGAGAACATTTTTGGTCTAATGCAGAAAGAGGAAACATTTTGTGGACAGGAGAAATTGTTGGAGTGGATATTGACAATACATAATTTTTCAGTCTTGTTGTGGTTTTTGACCGGAGGAGGTGCAATGACTTTAGCAAATTGGTTGAGTAAAGCCGCCGTTGAAGAGCAAACGAGTGTGCTGCTTCTTGTCTTGAAGGTTCTTTGTCATTCGCCTTTACATAAAGCCCTTCCTGCCCATATATCAGCTTTATTGCAGAGTGTTAATAGACTGCGGTTCTACAGGACATCAGACATATCTAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTGTTAACAAGGAACCAAGCCATAAAGAAACCCAATGGTGTTAAGCTTTCCGGTGATGGTTGGAAAGAGACAATACTTTCTCAGAGCATTGGTCAAACCATCAGCACTGAATCATGGCATTTTGATGTTCCTGAAGACATTCTTGCTCTCTCGAATGAATTTTCAGATGATTTCAGGAAACCGGAATCTCATTCTGTGAAATTGTTACTACCCAGTTCAGATGATTGTAATAAGAAACACCCCCTTGGTGTATCTTCATCTCAATCCAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGATCGGTGAGTAGAAGTCCACAGGCGGCAAGGACAGGGCCAGTAAGTCAGGGCCGTCCTATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCATTATTTATGCAGAGTAAGTACGGGAAAACTGCATCAAAAGAAAATAAAGCCAAAATCAATAGTCCAAGTAAATCTCAGACAAAGCAGGCAAGTATTGCAGTTTGCTCTTCTAAAGTTCCAGTGCCACTAAGAAATGAAGAAGACAAGAAACCTCTGCTGCTTCCCTCTAAAACTACTAATAGGCCAGAAGCTTCTTATTCTAAACTGAAAATGGATTTGAAGGAACCTCTCTGGGAGAAGTGCAAGAGGGTGAAAATACCCTGGAAAACACCAGCAGAAGTAGAAATTAAAGATACCTGGAGAGTTGGTGCTGGTGAAAATAGCAAAGAGGTTCATGTTCAGGAAAACAGAAACCACAGGGACAAAGAATCCATTTATCGGACAGTACAAGAGATGCCCTCTAACCCCAAGGAGCCTTGGGATGTCGAAATGGACTATGATGACTCTTTGACACTGGAAATTCCTATTGAACAGCTACCGGATGGTGATGGCCCAGAAATAGAAGATGCATCCAATCAAGTTGAAACTCATGCTGCTGCTGTTCAAGGTGTGGCCTCCACATCTTCAGCCAGTAATGCAGCCACTGCTGAACCTGATTTAGAGTTGCTTGCCGTACTGCTAAAAAATCCAGACTTGGTGTTTGCCCTTACTTCTGGACAAGTTAGCAACACATCGAATGAGGAAACCTTGAAGGTGCTTGACATGATCAAAAGAGGCAGTGTGAACTTGGGATTAAGTGTAAATGCAAATGGCAACCCTGGTACTAGCGCAAAAGCCCCCGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACTCCTTCAAGAGATCCGAGCACGAGTGGATGCAGCATAGAAGCACCAAAGAATCCATTTACGCAGCAAAACTTAGCACATGATAGAAGAATTTTCCAGAGCTCTGCTTCAATTGCAACTACCAACTTATCATCTCAGATTCCAGCAACTAGCACTACAGTACGGCAACAGCAAACATTTGTTCCATTTTCAAAGCAGCTCAACGGCACAACAGCATCTCTATACTCACTACATCAGGCAACTAATATTATTCCTGAAAAACAACCAGTTCACTCCCATTCTTCCGTGTATGTACAAACACCATTCTCTGATAGAGGTTTAGCTATGAAGAACACAATCACTGCAGATGTATCTCCAGTTGGTGCACATTCAGCACATCTAGCAATGCGGGCTGATGGCATAAGTAACATAAAACCAGTAGTACCTAATTCTAGTATGCAACAAGAGGGTTTGTCTAATTCATTCCCACAATCCTTCACGTTGACCTCACCAACAACATCACGCTCTGTCGCACAACAACAGAGACATGCACATATGATACCCAACCAGCCCCATTTCGTCGAACCTTCTTATCATAACCCTGTTCATCCCTATCAACCACAATTCGAAAAATCAGACCCTGTGTCAGATTTGCGGAGAGTTAGACAGGATATACCACCGAGTTATCATTCTCAGCAAAATCATAACTATAACCCATTGGTTGGGGGATCCATGCAATCTGGCTCTTGGGATAGAAACAATTATGAAAGGGGGGGATTGGAATCGTGGAGTCCGCACGATAGTCCAACTAGGAATCCTAGGTATGCTCCAGGGAGGAATCCCCCGGAGTCCAGAATGAATAATGTAAGAAGTCAAAGACCTGAATGGTCAAGACAGCGGGGTTCTTCTGGACACTGGGACCGTGGTAGGCATGAGAATAGAAAATGGCATGATCAGAGGCGGTGA 3066 0.4331 MELWNDGLSELEIGTSVESFQKFLGSQRELLHSQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTVTQVRDYFTSQRSRVRKQVQLSKERTLKSNTCAESLDAQINSDPMTSMNPAPLNSVGATNMEQASYSVQEAALSDLDDSDKQFVENIFGLMQKEETFCGQEKLLEWILTIHNFSVLLWFLTGGGAMTLANWLSKAAVEEQTSVLLLVLKVLCHSPLHKALPAHISALLQSVNRLRFYRTSDISNRARVLLSKWSKLLTRNQAIKKPNGVKLSGDGWKETILSQSIGQTISTESWHFDVPEDILALSNEFSDDFRKPESHSVKLLLPSSDDCNKKHPLGVSSSQSRERRKVQLVEQPGSVSRSPQAARTGPVSQGRPMSADDIQKAKMRALFMQSKYGKTASKENKAKINSPSKSQTKQASIAVCSSKVPVPLRNEEDKKPLLLPSKTTNRPEASYSKLKMDLKEPLWEKCKRVKIPWKTPAEVEIKDTWRVGAGENSKEVHVQENRNHRDKESIYRTVQEMPSNPKEPWDVEMDYDDSLTLEIPIEQLPDGDGPEIEDASNQVETHAAAVQGVASTSSASNAATAEPDLELLAVLLKNPDLVFALTSGQVSNTSNEETLKVLDMIKRGSVNLGLSVNANGNPGTSAKAPEKVEVSLPSPTPSRDPSTSGCSIEAPKNPFTQQNLAHDRRIFQSSASIATTNLSSQIPATSTTVRQQQTFVPFSKQLNGTTASLYSLHQATNIIPEKQPVHSHSSVYVQTPFSDRGLAMKNTITADVSPVGAHSAHLAMRADGISNIKPVVPNSSMQQEGLSNSFPQSFTLTSPTTSRSVAQQQRHAHMIPNQPHFVEPSYHNPVHPYQPQFEKSDPVSDLRRVRQDIPPSYHSQQNHNYNPLVGGSMQSGSWDRNNYERGGLESWSPHDSPTRNPRYAPGRNPPESRMNNVRSQRPEWSRQRGSSGHWDRGRHENRKWHDQRR 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04699 1021 MobiDBLite consensus disorder prediction 984 999 - -
Trre13g04699 1021 MobiDBLite consensus disorder prediction 443 469 - -
Trre13g04699 1021 MobiDBLite consensus disorder prediction 403 419 - -
Trre13g04699 1021 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1008 - -
Trre13g04699 1021 MobiDBLite consensus disorder prediction 445 469 - -
Trre13g04699 1021 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Trre13g04699 1021 Gene3D - 68 136 - -
Trre13g04699 1021 MobiDBLite consensus disorder prediction 926 953 - -
Trre13g04699 1021 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Trre13g04699 1021 MobiDBLite consensus disorder prediction 1000 1021 - -
Trre13g04699 1021 MobiDBLite consensus disorder prediction 846 886 - -
Trre13g04699 1021 MobiDBLite consensus disorder prediction 846 1021 - -
Trre13g04699 1021 SMART HOX_1 68 130 IPR001356 GO:0003677
Trre13g04699 1021 MobiDBLite consensus disorder prediction 684 725 - -
Trre13g04699 1021 MobiDBLite consensus disorder prediction 707 725 - -
Trre13g04699 1021 MobiDBLite consensus disorder prediction 380 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04699 Trre-Chr13 54035567 54044916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04699 10 731 Homeobox Transcription Factor Family AT4G02560 48.997 0.0 662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04699 13 54035567 54044916 Trre13g04699 13 54035567 54044916 ECH