Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04654 ATGAAGATGAGATTCTTCCTTGTTGCTTCAATGGTGCTTTTCTGTATCCTTGGGATTAGTGAAGGAGGTAGCTTAAGGAAGAATTTCTATAAGAAATCATGTCCTCAAGCTGAGCAGATTGTTAAGAACATAACCCAACAACATGTCTTTTCAAGGCCTGAACTCCCAGCCAAGTTGCTAAGATTGCATTTTCATGATTGTTTTGTTAGGGGGTGTGATGCTTCTATTTTGTTGGAGTCTACTGCAAGTAACAGTGCAGAGAAAGATTCAATTCCTAATTTATCATTACAAGGTTTTGATGTGATAAAGGAAATAAAAGAAGCTGTGGAGGAAAAATGTCCAGGAATTGTTTCATGTGCTGACATACTCACATTGGCTGCTAGAGATGCTGTTTCTGTCCAATTTGATAATAAACCAAAGTGGGAAGTGCTTACTGGTAGAAGAGATGGTATTGTGTCCAATAACTTTGAAGTTTTCCAAAATATCCCAGCACCTTTTCATAACCTCACCGAGCTTAGACAAAACTTTGCCAAGAAAAAACTTACTCTTCATGACTTGGTTGTATTATCAGGTGCACACACAATTGGAGTAGGACATTGCAACTTATTCAGCAACAGGCTTTTCAATTTCACTGGAAAAGGAGATCAAGATCCATCTCTAAATCCAACCTATGCCAATTTCTTGAAGACCAAGTGTCAAAGCCTTAGTGACACCACCACAACAGTAGAAATGGATCCAAATAGCTCAACAAAATTTGATGGAAATTACTATCCTATCCTTCTACAGAACAAAGGTCTCTTCATATCAGATGCTACTCTTCTAACAAGCAAGCAATCCAGAAACATTGCTAATGAATTGGTTTCACAAAACAAATTCTTCACTGAATTTGCACAGTCAATGAAGAGGTTGGGAGCTGTTGAAGTCCTCACAGGTTCAAATGGAGAAATTAGGAGGACATGTTCTGTTGTTAATTAA 975 0.3785 MKMRFFLVASMVLFCILGISEGGSLRKNFYKKSCPQAEQIVKNITQQHVFSRPELPAKLLRLHFHDCFVRGCDASILLESTASNSAEKDSIPNLSLQGFDVIKEIKEAVEEKCPGIVSCADILTLAARDAVSVQFDNKPKWEVLTGRRDGIVSNNFEVFQNIPAPFHNLTELRQNFAKKKLTLHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPSLNPTYANFLKTKCQSLSDTTTTVEMDPNSSTKFDGNYYPILLQNKGLFISDATLLTSKQSRNIANELVSQNKFFTEFAQSMKRLGAVEVLTGSNGEIRRTCSVVN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04654 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre13g04654 324 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 Gene3D Peroxidase, domain 2 163 303 - -
Trre13g04654 324 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 FunFam Peroxidase 28 178 - -
Trre13g04654 324 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601|GO:0042744
Trre13g04654 324 Gene3D - 28 324 - -
Trre13g04654 324 FunFam Peroxidase 163 303 - -
Trre13g04654 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 PANTHER PEROXIDASE 25-RELATED 13 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g04654 324 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04654 Trre-Chr13 53753694 53755689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04654 3 324 Peroxidase AT4G11290 51.368 1.40e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04654 K00430 - mtr:25499574 557.37