Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04601 ATGGGTTCCCTTCCCCACGTAGTAGAGGATTGCATGGGCTTCCTCAAACTCTTTAGTGACGGTTCAGTTCACCGTTCAAACAACTTCAAATTTCCTGTTTCCACCATTGAAGACAACTCAATATCCTTCAAAGATTGTCTTTTTGACAAAAAATTTAACCTCTCTCTTCGCCTCTACAAACCCAACAACAATAAAAATAACAACAACAAAAACAAACTTCCTGTTATTATGTTCCTTCACGGTGGTGGCTTTTGTTTCGGCTCACGCACGTGGCCTCATATTCACAATTGTTGTGTGCATCTTGCCACTGGACTTCAAGCTCTAGTGCTTGCGCCAGACTATCGGCTCGCACCAGAGCATCGTCTTCCAGCAGCGGTTGATGACGCCGTTGAAGCGATTAGATGGCTTCAAAGGCAAGGGTTAAGCCATGGTTGTGGAGAGCCATGGTTGACCAGTGATGTTGACTTTGACCGTCTATTTATTATTGGTGACTCTTCTGGCGGAAACATTGCGCACCAGCTTGCAGTTCAGTTTGGATCAGATCCAACAACTATTGAACCAGTTCGGGTAAGAGGTTATGTATTATTGGCGCCATTTTTTGGTGGGGAGGTACGAACCAAGTCAGAAGAAGGACCTTCGGAACAAACATTGAATCTTGATTTACTAGATAGATTTTGGAGGTTGTCCATGCCTATTGGAGAGACTAGAGACCATCCATTGGCGAATCCATTTGGACCTTGTAGCCCAAATCTTGAAAAAGTGAAACTTGATCCCATTTTGTTGATAGTTGGTGGCAATGAATTGCTTAAAGATAGGGCTTCAAACTATGCAACAAGGTTGAAAGAGTTAGGAAAAGACATTAAATACATTGAGTTTGAGGGGTGTGAGCATGGATTTTTCACGCATGATTCATATTCAGAAGTTGCAAATGAAGTTATCCATATTCTTAAAAGATTCATGTTTGAAACTTCTACTTAG 978 0.4192 MGSLPHVVEDCMGFLKLFSDGSVHRSNNFKFPVSTIEDNSISFKDCLFDKKFNLSLRLYKPNNNKNNNNKNKLPVIMFLHGGGFCFGSRTWPHIHNCCVHLATGLQALVLAPDYRLAPEHRLPAAVDDAVEAIRWLQRQGLSHGCGEPWLTSDVDFDRLFIIGDSSGGNIAHQLAVQFGSDPTTIEPVRVRGYVLLAPFFGGEVRTKSEEGPSEQTLNLDLLDRFWRLSMPIGETRDHPLANPFGPCSPNLEKVKLDPILLIVGGNELLKDRASNYATRLKELGKDIKYIEFEGCEHGFFTHDSYSEVANEVIHILKRFMFETST 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04601 325 PANTHER ARYLACETAMIDE DEACETYLASE 13 300 - -
Trre13g04601 325 Gene3D alpha/beta hydrolase 18 323 IPR029058 -
Trre13g04601 325 SUPERFAMILY alpha/beta-Hydrolases 5 320 IPR029058 -
Trre13g04601 325 Pfam alpha/beta hydrolase fold 76 300 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04601 Trre-Chr13 53435277 53438098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04601 7 314 Carbohydrate Esterase AT5G16080 35.144 6.96e-58 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04601 - - gmx:100803077 509.22