Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04561 ATGGACCCTACTGATAAAGAAGAGAAGGCTATCTGTGTAATTGGTGACCAATCAACTAGCGATGTTGTGGTGAGGCTACGTACGCAGGAAGGTCGAGATGATCGGTTGTACTGTCACTCAGCGGTACTTGTTAAAAATTGCAAGTATTTTGCAGACCGTTTGTCTGAGAATTGGCCAACTTGTCAGATCCTGGGTTCGCGCAATTGTGTTGATGTTAATTGCCAAGAATCGGATTTTGATTACCATGTAAATCTTATTCGACTTCTCTACATTGTCGTTGATGGTTCGGTTGATGATTTGTGGCATGGTGTTAGAAATGCTCTTGGTATTCTTCAGGTGGCTGTTGAACTTGAATGCCCGAAAATTGTTACTGCGTGTGTGAGTTACTTGGAAGCAATGACATGGGAAGAGAGTGAAGAGGAGGAGATATTGAAAGTTGTACCTCGAATGGGATTACAAGCAGAGCCTATCCTAGCTAGAGTTCAACCGGTCAACCAGTTAGCTATTAGAAACATCTTTCTCTCGGCCATTCGTTTTGCTACATCATCCCCTCCAGCGACAATGAAGGATCTGAAATCTTCAGCACAAGAGCAACTTGAGTACATGCTAACTGAGGATGATGATGCCCCTTTGTTGATTGCTGATGACAATATAAAATTTGAGATATTGAGTAAGTTGGAAATAATGGGAGAATTTGTTGAGTGTTGGTTTTATGCATCAGAAAACATTGTCAAAGCACTCGAACAAGGAAGTTCTACAAATGAAGTCATTGAGTTAAAGTTGCGAGCCATTGAAGTCACGTCAAAGGTTTTAGAGGCAATTGCTTATGGTACTGTTATACTGCCAACTGCAAAACGTCTTCAGGTTTTGAAATTGTGGCTTCCATTTGTGAGGGTTACAAAACCAATTATTGATTCTTCCATGATGGATTGTGAGAATGCTGTTTTGCTTAAAATGGATGGCGAAATGTGGCAATCCCTGGAATCCAGTTTTGTTTCTATCATCCTTGCGTTACCATCAGGGGATCAGGCAGAGCTTTTAACTCAATGGTTGGAAAACGAGCATATCCGGTATCCAGATCTGACTGAGGCATTTGAAGTATGGTGTTATAGGTCCAAGGTTGCTAGGAGAAGACTATCATTGCTAGAGGATGATCATGTCATGACCCAGTCAGGGTGA 1179 0.4165 MDPTDKEEKAICVIGDQSTSDVVVRLRTQEGRDDRLYCHSAVLVKNCKYFADRLSENWPTCQILGSRNCVDVNCQESDFDYHVNLIRLLYIVVDGSVDDLWHGVRNALGILQVAVELECPKIVTACVSYLEAMTWEESEEEEILKVVPRMGLQAEPILARVQPVNQLAIRNIFLSAIRFATSSPPATMKDLKSSAQEQLEYMLTEDDDAPLLIADDNIKFEILSKLEIMGEFVECWFYASENIVKALEQGSSTNEVIELKLRAIEVTSKVLEAIAYGTVILPTAKRLQVLKLWLPFVRVTKPIIDSSMMDCENAVLLKMDGEMWQSLESSFVSIILALPSGDQAELLTQWLENEHIRYPDLTEAFEVWCYRSKVARRRLSLLEDDHVMTQSG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04561 392 Gene3D Potassium Channel Kv1.1; Chain A 13 153 IPR011333 -
Trre13g04561 392 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 14 219 IPR038920 -
Trre13g04561 392 SUPERFAMILY POZ domain 18 130 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04561 Trre-Chr13 53064511 53066272 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trre13g04561 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04561 - - gmx:100797958 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04561 13 53064511 53066272 Trre13g04561 13 53064511 53066272 ECH