Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04545 ATGCAACATCATTTCAACGAAGCTTACTACGGGCCTATCATATTTCCATTGGTGCCGCGGCAACCAACAGCTATCGTCACCACCGTGATAGAAGTTGTTGTAGCTATCTGTTCAGCATCTTCTGGAAGCATCTATTACGACAAAGTGGAGGCTCGAGCATTCTACGAAAGGTCAAGATTTGCAGATGTCGATGTGATCACACACATGAACTACTCATTCCGCCAATATAAGAGGAGTAGTGATCATATGAGTTGTGTTTTCTCAGGACAACGACTAATGAGGCTCAACAATGATCAAATATCTAAACTCAACAAAGACAAGAGTCTTGGGGTTTATGATATCGATAAGAGTCACGGAATTTATGATATCCATGTGAAACTTTACTTTAAAATTAGGTTCAGACGCGGAGATACAATTTCTCGCAAGTTTAAACCCAAGGTGAAATGTGACCTCAAGGTTCCATTGAGCTCTAGTAATAATGAAACATTTACTTTCCATAATTGGATTTTGCCCAACAAATGCAAAGTTGCATTCTAG 537 0.3966 MQHHFNEAYYGPIIFPLVPRQPTAIVTTVIEVVVAICSASSGSIYYDKVEARAFYERSRFADVDVITHMNYSFRQYKRSSDHMSCVFSGQRLMRLNNDQISKLNKDKSLGVYDIDKSHGIYDIHVKLYFKIRFRRGDTISRKFKPKVKCDLKVPLSSSNNETFTFHNWILPNKCKVAF 178
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04545 Trre-Chr13 52894690 52895414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04545 38 170 SNARE and Associated Proteins AT1G32270 28.571 1.90e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04545 - - tpra:123889192 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04545 13 52894690 52895414 Trre1g02312 1 18549872 18550579 PCT