Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04536 ATGCATGAGAAACAACAATTAAACGGAGCCTACTATGGCCCATCAATCCCCCCACCAAAATCCTACCACCGCCCCTCTCGCGGCGGCGGTTTCGACTGCTGCTGTGGTTGTCTCTTCAACCTCATCTTCAAACTAATCCTCACCGTCATCATAATCCTCGGCATCCTCGTCTTTCTCTTCTGGCTCATAGTTCGTCCCAACGTTGTCAAAGTTCATGTCACAGAAGCAACTCTCACACACTTCAACTACACAAACAGCAACAGCAACCTTAACTATGATCTCTCCTTAAACATCACAATTCGTAACCCAAATAAAAAACTAGGAATTTACTACGATTACATCGAAGCTAGAGCATTATACCATGATGTTAGAGTTGACTCTGTTTTGATAGACCCATTTTATCAAGGACATAAAAGTACTAACTTGTTGAATCCTTCATTTAAGGGTCAGAAAGTGATTGTTCTTGGTGCTGATCAGAGTTTGGATTTGAGTAAAGAAAAAGATGCTGGTGTTTATGAAATTGTTGTGAAGATGTATCTTAGGGTGAGGTTTAAATTGGGTGTGATTAAGACAAGGAAGATTAAGCCAAAGATTACATGTGAGTTGCGTATTCCTTTGAAATCTGCCGGTGGTGGTTCGTCGGCCGGCGGTGGTTTTGAGGCCACCAATCGTATACTTCTAGAGGGTTATTTTGGGGATTTTATGAGGTGA 711 0.4205 MHEKQQLNGAYYGPSIPPPKSYHRPSRGGGFDCCCGCLFNLIFKLILTVIIILGILVFLFWLIVRPNVVKVHVTEATLTHFNYTNSNSNLNYDLSLNITIRNPNKKLGIYYDYIEARALYHDVRVDSVLIDPFYQGHKSTNLLNPSFKGQKVIVLGADQSLDLSKEKDAGVYEIVVKMYLRVRFKLGVIKTRKIKPKITCELRIPLKSAGGGSSAGGGFEATNRILLEGYFGDFMR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04536 236 PANTHER OS05G0367900 PROTEIN 33 208 IPR044839 GO:0098542
Trre13g04536 236 Pfam Late embryogenesis abundant protein 97 200 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04536 Trre-Chr13 52856454 52857430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04536 63 218 SNARE and Associated Proteins AT1G32270 40.385 1.68e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04536 - - gmx:100793187 293.508