Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04473 ATGCAGAACAGTGAGGAAGAAAAATTGATAGCGCGAAAATTGAAGATTACTGATAAGAAAAAAGGTTTTATAGAGTTACTGCAACAACTAAGCATTTGTGATTCAGTTTCTGAAAAGGAATTTGAGGATCGATTTAAAGAGCTTGATTCAGTTGGAGATGATCATGTTATTTGTGTTATTGAGGATGAGATTTCTGGAAAGATTATTGCAACGGGGAGTGTGTTTATTGAGAAGAAATTTTTGAGAAATTGTGGTAAAGTTGGACATATAGAAGATGTTGTTGTTGATTCAAGTGCTCGTGGGAAGCAATTAGGGAAGAAAGTGATTAATTTTCTTATTGATCATGCTCGTTCTGTAGGAAGTTCAGATGACTATGTATTTTGTTTGATTAAAGGGTCTGCCAAGTGGAGAGGTGATGGAAAGGAACAAAATGAAGAAGGAATTTGA 447 0.3468 MQNSEEEKLIARKLKITDKKKGFIELLQQLSICDSVSEKEFEDRFKELDSVGDDHVICVIEDEISGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSARGKQLGKKVINFLIDHARSVGSSDDYVFCLIKGSAKWRGDGKEQNEEGI 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04473 148 Pfam Acetyltransferase (GNAT) family 37 121 IPR000182 GO:0016747
Trre13g04473 148 CDD NAT_SF 59 120 - -
Trre13g04473 148 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 148 IPR000182 GO:0016747
Trre13g04473 148 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 121 IPR016181 -
Trre13g04473 148 Gene3D - 1 130 - -
Trre13g04473 148 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 3 128 IPR039143 GO:0004343|GO:0006048
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04473 Trre-Chr13 52295147 52296088 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre13g04473 Acetyltransf_1 3.3e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04473 K00621 - jre:108979803 194.897