Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04449 ATGGATTTCTTTCCCTTTCTACTCTCTCTAGTTTTCTTCCTTATGTTACATCTCTCAGGACAAAGAGTGGTAGAAGCTGAAAGTGATCTTGTAAAACATCATCATCATAAGAGTATAACAAAATTATTTGTTTTTGGAGATTCATATGCTGACACAGGAAATATCAAAAGAGGTTTTGCTAGTTCTTGGAAAAATCCATATGGTATCACCTTTCCCGGCAAGCCGGCCGGCCGTTTCTCCGACGGCAGAGTCCTCACCGACTACATTGCCAAGTATTTGAAAATGAAATCACCAGTCTCATATAGAGTGAGAAAACAGGTGATGAGACATCATTTGAAATATGGAATGAACTTTGCATTTGGTGGTACTGGTGTATTTGATACGTTGTTTCAAGGCCCAAACATGACAACCCAGATCAATTTTTTGGAAAGGGCCATAAAAGACAAATTGTACACAACTGAAGATATCAATAATTCAGTTGCTCTTGTCTCTGTCGCTGGAAATGATTACACTCGTTACACTGTCACAAATGGCTCTATTGAGGGTTTACCATCATTCATAGAATCAGTGATTAATCAAACAATCACAAATTTAATTGACATCAAAGGATTAGGAGTGAAGAAAGTGATTATATCTAATCTACAACCAGTTGGATGTCTACCTCAAACAACAGCTTCATCTTCATTCAAACAATGTAATGAAACAACTAACAATCTCCTAGCACTTTACCATAACACACTGTTAACTCAAGCTGTGACCAAATTGAACCAACAAAATAAGGATCATCATTCTTCAATACCCTTTTTAGTTCTTAATCTTTATGATAGTTTCATGTCAGTGTTGAATCATCCATCCACACACAACATTAAGGATAAGTTGAGACCATGTTGTGTTGGAGTGAGTAATGAGTATGCATGTGGAAGTGTTGATGAGAATAATGTTAAGAAATATTTGGTTTGTGAGAAACCAAAATCAGCTTTCTTTTGGGATTTGGTTCATCCTACTGAGGCAGGGTGGCATGCTGTGTATAATAAGCTGAGAGTCATGAATGCTCTTCAACAGATTCATTATTAG 1074 0.3669 MDFFPFLLSLVFFLMLHLSGQRVVEAESDLVKHHHHKSITKLFVFGDSYADTGNIKRGFASSWKNPYGITFPGKPAGRFSDGRVLTDYIAKYLKMKSPVSYRVRKQVMRHHLKYGMNFAFGGTGVFDTLFQGPNMTTQINFLERAIKDKLYTTEDINNSVALVSVAGNDYTRYTVTNGSIEGLPSFIESVINQTITNLIDIKGLGVKKVIISNLQPVGCLPQTTASSSFKQCNETTNNLLALYHNTLLTQAVTKLNQQNKDHHSSIPFLVLNLYDSFMSVLNHPSTHNIKDKLRPCCVGVSNEYACGSVDENNVKKYLVCEKPKSAFFWDLVHPTEAGWHAVYNKLRVMNALQQIHY 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04449 357 Gene3D SGNH hydrolase 28 355 IPR036514 -
Trre13g04449 357 Pfam GDSL-like Lipase/Acylhydrolase 42 345 IPR001087 GO:0016788
Trre13g04449 357 SUPERFAMILY SGNH hydrolase 40 346 - -
Trre13g04449 357 PANTHER OSJNBB0059K02.9 PROTEIN 17 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04449 Trre-Chr13 52087250 52091804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04449 34 342 Pollen Coat Proteome AT1G75930 25.749 9.10e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04449 - - psat:127128969 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g04449 13 52087250 52091804 Trre13g04449 13 52087250 52091804 ECH
Trre13g04449 13 52087250 52091804 Trre1g02417 1 19456356 19456877 PCT