Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04447 ATGTTACAAAATTTGTTACTACTACTTCTACTTCCTATCTTTCTCCATTGTTTTCCTATATTGATTCAAGGATCAAATCAATATGAAAGAAAGCCATATATTGTATATATGGGAGAACTACCAGCTGCAAGAGCTCATACGATGGAGCAACATCACTATAACATGTTGGAGGCTGTTATTGGAAACAAGCAGTTAGCCAGAGAATCCAAAATACATAGCTATGGAAAGAGCTTCAATGGATTTGTTGCAAGACTTTTGCCTCATGAAGCAGAGAAACTGAAAGAAGAGGAGAATGTGGTGTCTGTGTTTAGAAATACATACAGTAAACTACACACAACAAGGTCATGGGATTTCATAGGAATGCCCCTCAAAGTGAAAAGAAACCCCAACATAGAAAGTCACATCATTGTGGGCGTGTTAGACACAGGTATTTGGATTGATTGCCCAAGTTTCAATGATGAGGGGTATGGACCTCCCCCACGTAGATGGAAAGGCAAGTGTATCATGGGAGCCAACTTCACTGGCTGCAACAACAAGGTAATCGGAGCAAAATACTTCAACCTCGACCCAACTGGGCCAATGATCGAAAACCCGAGTGCAGTTGACGATCAAGGCCATGGAACTCACACGTCGTCAACCGCGGCAGGATCGGTGGTGAGGGGTGCAAGTCTTTATGGAATTGGTGAAGGCACTGCACGTGGCGGTGTCCCATCAGCACGTATTGCAATGTATAAGGTTTGTTGGAGTATTGGATGCAGTGACATGGACATGCTTGCTGGATTTGATGAAGCCATTGCTGATGGTGTCAATTTCATATCAGTGTCCATTGGCGGACCCTCGCGTGACTTTTTCTCTGACCCAATTGCTATTGGAGCATTTCATGCTATGAGAAGAGGTGTTCTCACTTCTTGTTCAGCTGGAAATGATGGTCCTCGACCTATGTCTGTTGAGAATGTTGCTCCTTGGATTATGACTGTTGCTGCTACCACCGTTGATAGACAGTACACCACACTAGTTTCCTTTGGTGATGGAAAGAATGTTACGGGACTATCTATTAATACATTTTCGCCTGAGAAAAATATGTATCCACTGACTAGTGGAACTCTTGCTGCTAACATTAGTGGAGATGCATATGGCAATCCTAGTGGCTGTGATTATGGGACTCTAAGCAAGGATAAGGTGAAGGGGAGAATAGTGTATTGTGCTGGGGGTACAGGTGGCCAGGACTTGACCATTAAAGAGTATGGAGGAGCAGGAACAATTATAGCTCTTGAAGATGAAGTAGATGCTTCCTACACAACAGTTATTGCAGGGGCATTTGTTGATATCAATACAGTAGGCAAAAACATTGAAACCTATATCAATTCCACAAAGAATCCTCAAGCTGTGATTTACAAAACAGGAAGTGCAAAATTCCCAGCTCCATATCTTGCTACTTTTTCATCTAGAGGTCCGCAACAAATCACTCGCAACATCCTCAAGCCTGACTTGGCTGCCCCGGGACTCGACATACTAGCTGCTTACTCCAAACTGGCAACGCTAACAGGGTACCCCGAAGACAATCGTTATGATGTTTTTAATATAATATCAGGAACTTCCATGGCTTGTCCACATGCCATTGCAGCTGCTGCTTATGTTAAATCCTTCCACCCTGACTGGACTCCTGCTGCAATTAAATCTGCCCTCATGACCACTGCAACTCCTATAAAAGCCAACGACAATTTCACGGAACTGGGATCAGGGTCAGGACAGATTAGTCCAGTAAAAGCATTGCATCCAGGCCTACTTTATGACATTAGAATGGACTCCTATATTGCCTTCCTATGCAAGCTAGGTTACAACAGCACCAACATTGGTATCCTTATTGGTAGCAAAAGTTTCAATTGCAACAGGGTTAAACCTGCACCAGGCACTGATGGAATCAACTACCCTACCATGCATATTCAGCTCCTGAATGCCACTTCTACAATTTCTGAAGTTTTTTACAGGACTGTGACTAATGTAGGATATGGAACTTCAACATACAAGGCTAAAGTCACAGCACCGGAGGGTCTTTCTGTGGAGGTCATCCCAGATACATTGAAGTTTAGTCAGTTGCACCAAGACCTGTCATTTAAGGTTGTCCTGAAGGGGCCTCCAATGCCGGCAGAGAAATCTATATTATCTGCAACTCTTGAATGGAATGACTTAAAACATAGTGTTAGAAGTCCAATAGTTGTCTTTAAGCCAACATTTTGA 2238 0.4316 MLQNLLLLLLLPIFLHCFPILIQGSNQYERKPYIVYMGELPAARAHTMEQHHYNMLEAVIGNKQLARESKIHSYGKSFNGFVARLLPHEAEKLKEEENVVSVFRNTYSKLHTTRSWDFIGMPLKVKRNPNIESHIIVGVLDTGIWIDCPSFNDEGYGPPPRRWKGKCIMGANFTGCNNKVIGAKYFNLDPTGPMIENPSAVDDQGHGTHTSSTAAGSVVRGASLYGIGEGTARGGVPSARIAMYKVCWSIGCSDMDMLAGFDEAIADGVNFISVSIGGPSRDFFSDPIAIGAFHAMRRGVLTSCSAGNDGPRPMSVENVAPWIMTVAATTVDRQYTTLVSFGDGKNVTGLSINTFSPEKNMYPLTSGTLAANISGDAYGNPSGCDYGTLSKDKVKGRIVYCAGGTGGQDLTIKEYGGAGTIIALEDEVDASYTTVIAGAFVDINTVGKNIETYINSTKNPQAVIYKTGSAKFPAPYLATFSSRGPQQITRNILKPDLAAPGLDILAAYSKLATLTGYPEDNRYDVFNIISGTSMACPHAIAAAAYVKSFHPDWTPAAIKSALMTTATPIKANDNFTELGSGSGQISPVKALHPGLLYDIRMDSYIAFLCKLGYNSTNIGILIGSKSFNCNRVKPAPGTDGINYPTMHIQLLNATSTISEVFYRTVTNVGYGTSTYKAKVTAPEGLSVEVIPDTLKFSQLHQDLSFKVVLKGPPMPAEKSILSATLEWNDLKHSVRSPIVVFKPTF 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04447 745 Pfam Fibronectin type-III domain 641 740 IPR041469 -
Trre13g04447 745 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 740 IPR045051 -
Trre13g04447 745 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
Trre13g04447 745 FunFam Subtilisin-like protease SBT1.5 134 352 - -
Trre13g04447 745 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 111 IPR037045 -
Trre13g04447 745 FunFam Subtilisin-like protease SBT5.3 22 111 - -
Trre13g04447 745 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 137 147 IPR023827 -
Trre13g04447 745 Gene3D Peptidase S8/S53 domain 135 604 IPR036852 GO:0004252|GO:0006508
Trre13g04447 745 CDD PA_subtilisin_like 339 464 - -
Trre13g04447 745 SUPERFAMILY Subtilisin-like 6 636 IPR036852 GO:0004252|GO:0006508
Trre13g04447 745 CDD Peptidases_S8_3 109 567 IPR034197 -
Trre13g04447 745 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Trre13g04447 745 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Trre13g04447 745 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Trre13g04447 745 Pfam Subtilase family 133 573 IPR000209 GO:0006508|GO:0008236
Trre13g04447 745 Gene3D - 332 470 - -
Trre13g04447 745 Gene3D - 608 742 - -
Trre13g04447 745 ProSiteProfiles Serine proteases, subtilase domain profile. 115 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04447 Trre-Chr13 52064124 52068085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04447 3 565 Subtilisin-like Serine Gene Family AT5G03620 60.664 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04447 - - aip:107648262 1149.42