Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04446 ATGAGTAATACAATAAAAATGTTACAAAATTTGTTACTACTACTTCTACTTCCTATCTTTCTCCATTGTTTTCCTATATTGATTCAAGGATCAAATCAATATGAAAGAAAGCCATATATTGTATATATGGGAGAACTACCAGCTGCAAGAGCTCATACGATGGAGCAACATCACTATAACATGTTGGAGGCTGTTATTGGAAACAAGCAGTTAGCCAGAGAATCCAAAATACATAGCTATGGAAAGAGCTTCAATGGATTTGTTGCAAGACTTTTGCCTCATGAAGCAGAGAAACTGAAAGAAGAGGAGAATGTGGTGTCTGTGTTTAGAAATACATACAGTAAACTACACACAACAAGGTCATGGGATTTCATAGGAATGCCCCTCAAAGTGAAAAGAAACCCCAACATAGAAAGTCACATCATTGTGGGCGTGTTAGACACAGGTATTTGGATTGATTGCCCAAGTTTCAATGATGAGGGGTATGGACCTCCCCCACGTAGATGGAAAGGCAAGTGTATCATGGGAGCCAACTTCACTGGCTGCAACAACAAGGTAATCGGAGCAAAATACTTCAACCTCGACCCAACTGGGCCAATGATCGAAAACCCGAGTGCAGTTGACGATCAAGGCCATGGAACTCACACGTCGTCAACCGCGGCAGGATCGGTGGTGAGGGGTGCAAGTCTTTATGGAATTGGTGAAGGCACTGCACGTGGCGGTGTCCCATCAGCACGTATTGCAATGTATAAGGTTTGTTGGAGTATTGGATGCAGTGACATGGACATGCTTGCTGGATTTGATGAAGCCATTGCTGATGGTGTCAATTTCATATCAGTGTCCATTGGCGGACCCTCGCGTGACTTTTTCTCTGACCCAATTGCTATTGGAGCATTTCATGCTATGAGAAGAGGTGTTCTCACTTCTTGTTCAGCTGGAAATGATGGTCCTCGACCTATGTCTGTTGAGAATGTTGCTCCTTGGATTATGACTGTTGCTGCTACCACCGTTGATAGACAGTACACCACACTAGTTTCCTTTGGTGATGGAAAGAATGTTACGGGACTATCTATTAATACATTTTCGCCTGAGAAAAATATGTATCCACTGACTAGTGGAACTCTTGCTGCTAACATTAGTGGAGATGCATATGGCAATCCTAGTGGCTGTGATTATGGGACTCTAAGCAAGGATAAGGTGAAGGGGAGAATAGTGTATTGTGCTGGGGGTACAGGTGGCCAGGACTTGACCATTAAAGAGTATGGAGGAGCAGGAACAATTATAGCTCTTGAAGATGAAGTAGATGCTTCCTACACAACAGTTATTGCAGGGGCATTTGTTGATATCAATACAGTAGGCAAAAACATTGAAACCTATATCAATTCCACAAAGAATCCTCAAGCTGTGATTTACAAAACAGGAAGTGCAAAATTCCCAGCTCCATATCTTGCTACTTTTTCATCTAGAGGTCCGCAACAAATCACTCGCAACATCCTCAAGCCTGACTTGGCTGCCCCGGGACTCGACATACTAGCTGCTTACTCCAAACTGGCAACGCTAACAGGGTACCCCGAAGACAATCGTTATGATGTTTTTAATATAATATCAGGAACTTCCATGGCTTGTCCACATGCCATTGCAGCTGCTGCTTATGTTAAATCCTTCCACCCTGACTGGACTCCTGCTGCAATTAAATCTGCCCTCATGACCACTGCAACTCCTATAAAAGCCAACGACAATTTCACGGAACTGGGATCAGGGTCAGGACAGATTAGTCCAGTAAAAGCATTGCATCCAGGCCTACTTTATGACATTAGAATGGACTCCTATATTGCCTTCCTATGCAAGCTAGGTTACAACAGCACCAACATTGGTATCCTTATTGGTAGCAAAAGTTTCAATTGCAACAGGGTTAAACCTGCACCAGGCACTGATGGAATCAACTACCCTACCATGCATATTCAGCTCCTGAATGCCACTTCTACAATTTCTGAAGTTTTTTACAGGACTGTGACTAATGTAGGATATGGAACTTCAACATACAAGGCTAAAGTCACAGCACCGGAGGGTCTTTCTGTGGAGGTCATCCCAGATACATTGAAGTTTAGTCAGTTGCACCAAGACCTGTCATTTAAGGTTGTCCTGAAGGGGCCTCCAATGCCGGCAGAGAAATCTATATTATCTGCAACTCTTGAATGGAATGACTTAAAACATAGTGTTAGAAGTCCAATAGTTGTCTTTAAGCCAACATTTTGA 2256 0.4295 MSNTIKMLQNLLLLLLLPIFLHCFPILIQGSNQYERKPYIVYMGELPAARAHTMEQHHYNMLEAVIGNKQLARESKIHSYGKSFNGFVARLLPHEAEKLKEEENVVSVFRNTYSKLHTTRSWDFIGMPLKVKRNPNIESHIIVGVLDTGIWIDCPSFNDEGYGPPPRRWKGKCIMGANFTGCNNKVIGAKYFNLDPTGPMIENPSAVDDQGHGTHTSSTAAGSVVRGASLYGIGEGTARGGVPSARIAMYKVCWSIGCSDMDMLAGFDEAIADGVNFISVSIGGPSRDFFSDPIAIGAFHAMRRGVLTSCSAGNDGPRPMSVENVAPWIMTVAATTVDRQYTTLVSFGDGKNVTGLSINTFSPEKNMYPLTSGTLAANISGDAYGNPSGCDYGTLSKDKVKGRIVYCAGGTGGQDLTIKEYGGAGTIIALEDEVDASYTTVIAGAFVDINTVGKNIETYINSTKNPQAVIYKTGSAKFPAPYLATFSSRGPQQITRNILKPDLAAPGLDILAAYSKLATLTGYPEDNRYDVFNIISGTSMACPHAIAAAAYVKSFHPDWTPAAIKSALMTTATPIKANDNFTELGSGSGQISPVKALHPGLLYDIRMDSYIAFLCKLGYNSTNIGILIGSKSFNCNRVKPAPGTDGINYPTMHIQLLNATSTISEVFYRTVTNVGYGTSTYKAKVTAPEGLSVEVIPDTLKFSQLHQDLSFKVVLKGPPMPAEKSILSATLEWNDLKHSVRSPIVVFKPTF 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04446 751 CDD Peptidases_S8_3 115 573 IPR034197 -
Trre13g04446 751 Pfam Peptidase inhibitor I9 39 117 IPR010259 -
Trre13g04446 751 SUPERFAMILY Subtilisin-like 12 642 IPR036852 GO:0004252|GO:0006508
Trre13g04446 751 Gene3D - 338 476 - -
Trre13g04446 751 FunFam Subtilisin-like protease SBT5.3 28 117 - -
Trre13g04446 751 Gene3D Peptidase S8/S53 domain 141 610 IPR036852 GO:0004252|GO:0006508
Trre13g04446 751 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 143 153 IPR023827 -
Trre13g04446 751 Pfam Subtilase family 139 579 IPR000209 GO:0006508|GO:0008236
Trre13g04446 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 39 746 IPR045051 -
Trre13g04446 751 Pfam Fibronectin type-III domain 647 746 IPR041469 -
Trre13g04446 751 Gene3D - 614 748 - -
Trre13g04446 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 117 IPR037045 -
Trre13g04446 751 CDD PA_subtilisin_like 345 470 - -
Trre13g04446 751 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Trre13g04446 751 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Trre13g04446 751 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Trre13g04446 751 ProSiteProfiles Serine proteases, subtilase domain profile. 121 597 - -
Trre13g04446 751 FunFam Subtilisin-like protease SBT1.5 140 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04446 Trre-Chr13 52064124 52068103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04446 9 571 Subtilisin-like Serine Gene Family AT5G03620 60.664 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04446 - - aip:107648262 1152.5