Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04432 ATGGAAACAAATTCAGATGCAGAGGTGATAACACTATCTCCCAAGACCCTATTGGCAACAAACATGTTTATTTGGGAGGTATGCAACAAAGGATTCCAAAGAGAACAAAACCTACAGCTACACATAAGAGGACACAATTTTCCTTGGAAGCTTAAGCAGAACACTATAAAAGAGCCTAAGAGAAAGTATTATCTATGTCCTGAGCCTAGTATAGATGTCATGTCACCGGCTGAGTGTTCTTTTCCGAAATATAGGAGGGTCTAA 264 0.3939 METNSDAEVITLSPKTLLATNMFIWEVCNKGFQREQNLQLHIRGHNFPWKLKQNTIKEPKRKYYLCPEPSIDVMSPAECSFPKYRRV 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04432 87 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 71 IPR031140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04432 Trre-Chr13 51874281 51874544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04432 4 70 IDZ Gene Family AT2G02070 83.582 9.72e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre13g04432 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04432 K25870 - zju:107428319 121.324