Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04294 ATGGGAAGATTTACTACTAGTTCTTGTAAAGGATTTTGGAAAGGAGGGTTTGGAATAATGATGAGGAAAGTAGTGGAGAAAAAAATATTATGGTCAGAAAAAGGAGTGAAGCAAGGTCATTTTGTGGTTATTGCAACACAAGGGTGGAAAGCAGAGAGATTTTGTATTGAATTGAGATATTTAGATCATCCTGAATTTGTGAAATTGTTAAAGCAAGCTGAAGAAGAGTTTGGATTTTCTCAAGTTGGAGCACTTGAAATTCCTTGTGAGCCAGATGAGTTGAAGAAAATCATAGGAAGGAAAAAACAACACATCAACAAGGGTATTACTATTACTTGTTAG 342 0.348 MGRFTTSSCKGFWKGGFGIMMRKVVEKKILWSEKGVKQGHFVVIATQGWKAERFCIELRYLDHPEFVKLLKQAEEEFGFSQVGALEIPCEPDELKKIIGRKKQHINKGITITC 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04294 113 Pfam Auxin responsive protein 33 98 IPR003676 GO:0009733
Trre13g04294 113 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04294 Trre-Chr13 50576726 50577067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04294 36 99 Calmodulin-binding Proteins AT4G34750 40.625 6.10e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04294 - K14488 gmx:100795119 150.984