Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04159 ATGGCTACTGCTAGTGTGTATGAAATTCGTCCTCCAACGATTGCTCCCACTTCCGAACCACCGCCTCTCTTCGATGGAACTACCAGGTTGTACATGAGTTATTCGTGCCCATTTGCGCAACGCGTATGGATTACTAGGAACTATAAGGGATTGCAAGACAAGATCAAATTGGTTCCTATTGATCTACAAAACAAGCCTGCTTGGTACAAAGAGAAGGTCCACCCTGAAAATAAGGTGCCATCTCTTGAACATGATGGCAAGATTTTAGCTGAAAGTATTGACTTGATCAAATATGTTGATGCAAATTTTGAAGGACCATCACTAGTGCCTAATGACCCAGCTAAGAAGGAATTTGGAGAGGAGTTGATAAAGTATGTTGATACTTTTACTAAAGATGTGTTTGGTTCGTTTAAGGGCGATGCTGTGACGCAAACAAGTGCTTCATTTGACTACTTGGAGAATGCTCTTGGTAAATTTGATGGGCCATTTTTCCTTGGTGAATTTAGTTTGGTGGATATTGTCTATATTCCATTCATTGAAAGGTTCCAAATTGCCTTCTTGGAATTGTATAAGCATGACATCACAGTTGAAAGGCCTAAATTTGCCACATGGATTGAGGAGTTGAACAACAATGATGCTTATAAGCAAACAAAACTTGCTAATCCAGAACAATTCGTTGGCTTTGTCAAGAAATTCTCGGGACAGTAG 708 0.4011 MATASVYEIRPPTIAPTSEPPPLFDGTTRLYMSYSCPFAQRVWITRNYKGLQDKIKLVPIDLQNKPAWYKEKVHPENKVPSLEHDGKILAESIDLIKYVDANFEGPSLVPNDPAKKEFGEELIKYVDTFTKDVFGSFKGDAVTQTSASFDYLENALGKFDGPFFLGEFSLVDIVYIPFIERFQIAFLELYKHDITVERPKFATWIEELNNNDAYKQTKLANPEQFVGFVKKFSGQ 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04159 235 Pfam Glutathione S-transferase, C-terminal domain 141 206 - -
Trre13g04159 235 SFLD Glutathione Transferase (cytosolic) 29 209 IPR040079 -
Trre13g04159 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 4 231 IPR044629 GO:0004364
Trre13g04159 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Trre13g04159 235 SFLD Main (cytGST) 29 209 - -
Trre13g04159 235 FunFam Lambda class glutathione S-transferase 105 235 - -
Trre13g04159 235 Gene3D Glutaredoxin 1 104 - -
Trre13g04159 235 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Trre13g04159 235 SUPERFAMILY Thioredoxin-like 18 108 IPR036249 -
Trre13g04159 235 SUPERFAMILY GST C-terminal domain-like 103 231 IPR036282 -
Trre13g04159 235 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Trre13g04159 235 Gene3D - 105 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04159 Trre-Chr13 49448517 49450644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04159 1 232 Glutathione S-transferase Gene Family AT5G02790 65.812 5.52e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04159 K00799 - gmx:100793025 352.058