Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04158 ATGGCTACTGCTGTGTATGAAATTCGTCCTCCAACGATTGCTCCCACTTCCGAACCACCGCCTCTCTTCGATGGAACTACCAGGTTGTACATGAGTTATTCGTGCCCATTTGCGCAACGCGTATGGATTACTAGGAACTATAAGGGATTGCAAGACAAGATCAAATTGGTTCCTATTGATCTACAAAACAAGCCTGCTTGGTACAAAGAGAAGGTCCACCCTGAAAATAAGGTGCCATCTCTTGAACATGATGGCAAGATTTTAGCTGAAAGTATTGACTTGATCAAATATGTTGATGCAAATTTTGAAGGACCATCACTAGTGCCTAATGACCCAGCTAAGAAGGAATTTGGAGAGGAGTTGATAAAGTATGTTGATACTTTTACTAAAGATGTGTTTGGTTCGTTTAAGGGCGATGCTGTGACGCAAACAAGTGCTTCATTTGACTACTTGGAGAATGCTCTTGGTAAATTTGATGGGCCATTTTTCCTTGGTGAATTTAGTTTGGTGGATATTGTCTATATTCCATTCATTGAAAGGTTCCAAATTGCCTTCTTGGAATTGTATAAGCATGACATCACAGTTGAAAGGCCTAAATTTGCCACATGGATTGAGGAGTTGAACAACAATGATGCTTATAAGCAAACAAAACTTGCTAATCCAGAACAATTCGTTGGCTTTGTCAAGAAATTCTCGGGACAGTAG 705 0.4014 MATAVYEIRPPTIAPTSEPPPLFDGTTRLYMSYSCPFAQRVWITRNYKGLQDKIKLVPIDLQNKPAWYKEKVHPENKVPSLEHDGKILAESIDLIKYVDANFEGPSLVPNDPAKKEFGEELIKYVDTFTKDVFGSFKGDAVTQTSASFDYLENALGKFDGPFFLGEFSLVDIVYIPFIERFQIAFLELYKHDITVERPKFATWIEELNNNDAYKQTKLANPEQFVGFVKKFSGQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04158 234 Gene3D Glutaredoxin 1 103 - -
Trre13g04158 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Trre13g04158 234 SFLD Main (cytGST) 28 208 - -
Trre13g04158 234 FunFam Glutathione S-transferase L2, chloroplastic 1 103 - -
Trre13g04158 234 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
Trre13g04158 234 SUPERFAMILY Thioredoxin-like 17 107 IPR036249 -
Trre13g04158 234 SUPERFAMILY GST C-terminal domain-like 102 230 IPR036282 -
Trre13g04158 234 Pfam Glutathione S-transferase, C-terminal domain 140 205 - -
Trre13g04158 234 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 230 IPR044629 GO:0004364
Trre13g04158 234 Gene3D - 104 233 - -
Trre13g04158 234 FunFam Lambda class glutathione S-transferase 104 234 - -
Trre13g04158 234 SFLD Glutathione Transferase (cytosolic) 28 208 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04158 Trre-Chr13 49448517 49450644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04158 7 231 Glutathione S-transferase Gene Family AT5G02790 67.257 7.79e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04158 K00799 - gmx:100793025 347.436