Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04157 ATGGCAGCAACTACTGTGAAACAAATTCGTACTCCTCCGTTAACTTCCAACTCCGATCCACCACCTATTTTTGACGGAGACACCAGATTGTACATCAGTTATATTTGTCCTTACGCACAACGTGCATGGATCACTAGAAACTATAAGGGACTACAAGACAAGATCAAATTGGTTCCTATTGACCTTTTGAACAGGCCTGCTTGGTATAAGGAGAAAGTCTACCCAGAAAATAAGGTGCCGTCGTTAGAGCACAACGGGAAGGTTTTGGGAGAAAGTCTTGATTTGATCAATTACATAGATGCCAACTTTGAAGGGCCATCTTTAGTTCCCAGTGATCCTGCTAAGAAAGAGTTTGCTGATCAGTTGATTTCTCATGTCGATACATTCACCAAAGACTTGTACTCTTCATTGAAAGGAGATCCTATACAACAAGCAAGTCCTGCCTTTGAGTACTTGGAGAATGCACTCGGTAAATTTGATGACGGGCCATTCTTTCTCGGACAATTCAGTTGGGTGGATATTGCCTACGTTCCATTTGTTGAAAGATTCCAGATAGTCTTTTCTGAGGTGTTCAAGTACGATATAACAGAAGGAAGGCCTAAACTTGCAACATGGATTGAGGAGCTTAACAAGATTGATGCTTATACACAGACAAGGGTCGAACCAAGTGAAATTGTCGATATTTTCAAGAAACGTTTTCTGGCTCAACAGTGA 714 0.4132 MAATTVKQIRTPPLTSNSDPPPIFDGDTRLYISYICPYAQRAWITRNYKGLQDKIKLVPIDLLNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLINYIDANFEGPSLVPSDPAKKEFADQLISHVDTFTKDLYSSLKGDPIQQASPAFEYLENALGKFDDGPFFLGQFSWVDIAYVPFVERFQIVFSEVFKYDITEGRPKLATWIEELNKIDAYTQTRVEPSEIVDIFKKRFLAQQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04157 237 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Trre13g04157 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 4 233 IPR044629 GO:0004364
Trre13g04157 237 MobiDBLite consensus disorder prediction 1 20 - -
Trre13g04157 237 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Trre13g04157 237 Gene3D Glutaredoxin 1 104 - -
Trre13g04157 237 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Trre13g04157 237 SUPERFAMILY Thioredoxin-like 15 108 IPR036249 -
Trre13g04157 237 SFLD Main (cytGST) 29 210 - -
Trre13g04157 237 Gene3D - 105 237 - -
Trre13g04157 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Trre13g04157 237 CDD GST_C_Lambda 112 230 - -
Trre13g04157 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Trre13g04157 237 FunFam Lambda class glutathione S-transferase 105 236 - -
Trre13g04157 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04157 Trre-Chr13 49440535 49443645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04157 10 234 Glutathione S-transferase Gene Family AT5G02790 68.444 2.64e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04157 K00799 - gmx:100793025 428.713