Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04131 ATGATGGTGATGAACACGAGTGCCATTGAAACATCATCGGATGGAGCCTGGCAGGGAGACAATCCATTGAACCATGGTCTTCCATTGTTGATCATTCAAACAACTCTAGTCATGTTTGTTAGCCGCACCCTCGCCTTCTTCCTCAAACCCCTTCGTCAACCGAGAGTTGTTGCTGAGATTATTGGTGGAATTTTGCTAGGACCTTCCGGTATTGGACGCAACAAAACTTTTATGCATACAGTTTTCCCTTCATGGAGTACTCCCATACTTGAATCAGTAGCCAGCATTGGCCTTATCTTCTATCTCTTCCTTGTTGGTCTTGAGCTCGACCTCCGCACCATCAACCGCACCGGCAAGCGAGCTTTTAAGATCGCTGTCGCCGGAATATCCCTCCCATTCCTCTTTGCCATCGGAGTAACCTTCCTTCTCCAAAAAGCCATCCATTTGAACTCTGAAACTCACAGAGTTAGTTACATTCAGCTCTTCATATTCTTAGGTGTATCTCTCTCCATCACTGCTTTCCCGGTACTCGCTCGCATCTTAGCAGAGCTCAAATTATTAACAACACACGTTGGAGAAACCGCCATGGCCGCGGCAGCTTTTAATGACGTCGCAGCTTGGGTTTTATTGGCACTAGCCGTTGCTTTAGCCGGCGGGGGAGGACAAAAAAACAGTGTCCTGACATCCATCTTAGTACTACTCTCTGGCATAGCTTTTGTCGTGTTTATGTTGTTTGTGATTAGACCAATTATGGAGCGTGTTTCGCTCCGTTGCTCACGGCAACACGAAGCGTTGGATGAAATGTTCATATGCATGACACTTGCGGGTGTTATGATATCGGGATTTATGACGGATTTGATAGGGATACATTCGATTTTCGGGGCTTTCATTTTTGGGTTAACGATTCCAAGAGGGGGAGAATTTGCAAGTAAACTTACTAAAAGGATAGAAGATTTTGTATCAAATTTGATGCTACCTTTGTATTTTGCATCTAGTGGGTTGAAAACGGATGTTGGTAAGTTACAAGGTGTGGTTGAATGGGGAATTCTTTTGCTTGTTATATTGACTGCTTGTGTTGGGAAGATTTTGGGCACTTTTGTTGTGGCAGTTATGAGTACTATGCCAGTTAGGGAATCTTTGACACTTGGTGTTTTGATGAATACTAAAGGGTTGGTTGAGATTATCGTTCTCAATATTGGCAAAGAAAAGAAGGTACTTAACGACGAGATGTTTACCATCTTGGTTCTCATGGCTATCTTCACCACCTTCATTACAACTCCGATAGTCGTAGCCATATACAAACCATCTCGTCAACGCCGATTTGGAAACCCTCCACCCCTGACAGACACACAAGAGAAGCTTCGCATTCTTGCTTGCATCCACGGAACTGGAAATATTCCGTCACTAATTAACTTTATTGAATCAGTTCGAGCTACCAACAAGTCTAGTAAGATCAAACTTTATGTGATGCAACTTACTGAACTCACTGATAGCTCATCATCCATCTTGATGGTTCAACGCAGTAGAAAGAGCGGGTTTCCATTCATCAATCGATTCCAAAGAGGAACCATGCACGATGCATTCCATGCTTTTGGTCAAGTAGGTCAAGTTACAGTGCATCATTTGACCTCAATCTCATCACTGTCTACCATCCACGAAGACATATGTCATATTGCAGAAGAGAAGGGTGTGGCAATGATCATATTGCCTTTTCACAAAAGGTGGAGAGGGGAAGATGAAGATGCAATAATAGAAAACACAGGACAAGGTTGGAAGGAAGTTAATCAAAGAGTGCTTCAGAGTGCACCATGCTCTGTTGCCGTGCTTGTTAATCGTGCCGTTAACAGAAGGTATGAACAAAGGGTCGAAACCAGTGCTACTTCAGGGAAAAAAGTGTGCATAATTTTCATTGGAGGACCCGATGATCGAAAGGTTTTAGAGTTGGGAAGTAGAATGGCAGAACATCCAGCAATTAGGTTGTCTGTTGTGAGATTCAAATCACACAAAGAAGGTACTTTCAGGGAACAAGAACAAAGCCGCAACACATCAACATCTGCTAACAATTGGGAAAATGATCAAAAGGAGTTGGATGAGATAGCAGTAAATGAATTCAAAACTAAATGGCTTGGAGCAGTGGAGTATATTGAAAATGACACTGCAAACATAGCAGATGAAGTTTTAGCAATTGGGAGGGTTAAAGAGTATGAACTTGTAATTGTGGGAAAGGGACATCAGCTTCTTGATTCAACCATGATGATTGACATAAAGGATTCTCGTCTAGAGCATGCTGAGTTGGGACCTATTGGAGATCTGTTAACTTCTTCATGTCAAGGCATTACGAGTTCAGTGCTCGTTATACAAGACCAACATTTTACAGATTCAAGCGAGACTATTCCTAGAAAAACATCTCAGAATACCATATCAGAATCATCCGTATAG 2439 0.4252 MMVMNTSAIETSSDGAWQGDNPLNHGLPLLIIQTTLVMFVSRTLAFFLKPLRQPRVVAEIIGGILLGPSGIGRNKTFMHTVFPSWSTPILESVASIGLIFYLFLVGLELDLRTINRTGKRAFKIAVAGISLPFLFAIGVTFLLQKAIHLNSETHRVSYIQLFIFLGVSLSITAFPVLARILAELKLLTTHVGETAMAAAAFNDVAAWVLLALAVALAGGGGQKNSVLTSILVLLSGIAFVVFMLFVIRPIMERVSLRCSRQHEALDEMFICMTLAGVMISGFMTDLIGIHSIFGAFIFGLTIPRGGEFASKLTKRIEDFVSNLMLPLYFASSGLKTDVGKLQGVVEWGILLLVILTACVGKILGTFVVAVMSTMPVRESLTLGVLMNTKGLVEIIVLNIGKEKKVLNDEMFTILVLMAIFTTFITTPIVVAIYKPSRQRRFGNPPPLTDTQEKLRILACIHGTGNIPSLINFIESVRATNKSSKIKLYVMQLTELTDSSSSILMVQRSRKSGFPFINRFQRGTMHDAFHAFGQVGQVTVHHLTSISSLSTIHEDICHIAEEKGVAMIILPFHKRWRGEDEDAIIENTGQGWKEVNQRVLQSAPCSVAVLVNRAVNRRYEQRVETSATSGKKVCIIFIGGPDDRKVLELGSRMAEHPAIRLSVVRFKSHKEGTFREQEQSRNTSTSANNWENDQKELDEIAVNEFKTKWLGAVEYIENDTANIADEVLAIGRVKEYELVIVGKGHQLLDSTMMIDIKDSRLEHAELGPIGDLLTSSCQGITSSVLVIQDQHFTDSSETIPRKTSQNTISESSV 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04131 812 Pfam Sodium/hydrogen exchanger family 36 429 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre13g04131 812 PANTHER CATION/H + ANTIPORTER 8 789 - -
Trre13g04131 812 MobiDBLite consensus disorder prediction 671 691 - -
Trre13g04131 812 FunFam Cation/H(+) antiporter 15 29 440 - -
Trre13g04131 812 Gene3D - 488 767 - -
Trre13g04131 812 Gene3D - 29 441 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04131 Trre-Chr13 49169164 49173112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04131 77 812 Antiporter Super Family AT3G53720 55.455 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04131 K26731 - gmx:100799165 1058.9