Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04130 ATGGTGAACATAACCTCCATCAAAACTTCCTCCAATGGTGTTTGGCAAGGCGATAATCCCCTCGATTTCGCTTTCCCTCTCCTCATTGTTCAAACCGTCTTAGTCCTCGTAGTTAGTCGCACCCTCGCCCTCATCTTCAAACCTCTCCGACAACCTAAAGTCATCGCCGAGATCGTCGGTGGAATTCTGTTAGGTCCATCGGCGTTAGGAAGGAGCAAAAGCTATTTGCACCACATTTTCCCGTCATGGAGTTTACCAACGCTTGAATCCGTCGCAAGCATAGGTCTATTATTCTTCCTCTTTCTCGTTGGTTTGGAGTTAGATCTAAACTCAATTCGCCGTAGCGGTAAAAGAGCATTCAGTATAGCAGCATGTGGAATCTCTCTTCCGTTCGTTTGCGGCATCGGCGTCGCCATTGTCCTCCGTAAAACCGTCGACGGAGCAGATAAAGCCGGATTCGGTCAATTCATCGTTTTCATGGGAGTCGCACTTTCAATAACCGCATTCCCCGTCTTAGCACGAATCCTCGCTGAACTCAAACTCCTCACAACGCGCGTCGGTGAAACCGCGATGGCAGCAGCAGCATTCAACGATTTAGCCGCGTGGATTTTACTCGCTTTAGCAATCGCGTTAGCCGGTAGTGGAACCGACGGCGGAGACAAAAAAAGCCCTCTCGTCTCCGTTTGGGTACTTCTCTCCGGTGTCGGATTCGTTGCCTTCATGATGATTGTTATAAGTCCTGTGATGAAGCGCGTGGCGCAAAGATGCTCTGTTGAGAACGAAGCAGTTGACGAAGTTTATATCTGTTTAACACTCGCGGGTGTAATGGTTTCAGGATTCATAACTGATTTTATAGGGATTCACGCGATTTTCGGCGCGTTTGTTTTCGGATTAACAATACCGAAAACAGGGAATTTTGCGGAAAGGTTGATAGAAAGAATAGAGGATTTTGTTTTGGGTTTGTTGCTTCCACTTTATTTTGCATCGAGTGGGTTGAAAACTGATGTGACTAAGATTAGTGGAGGAAAAGCTTGGGGGTTGTTGGTTTTGGTGATTTCAACAGCATGTGCTGGGAAGATTCTGGGGACTTTTGTTGTTGCTATGATGTGTAGGATGCCTGTTAGAGAGTCGATTACACTTGGAGTGCTGATGAACACCAAAGGACTTGTTGAACTCATTGTGCTCAATATTGGAAAAGAGAAAAAGGTTTTGAATGATGAAGTATTTGCAATCTTGGTACTTATGGCTTTATTCACTACCTTCATCACAACTCCACTAGTGATGGCAATCTACAAACCAGCTCGTGGCATAGCAGCCAAGACAATTCGCAAGCTAGGTGACATGTCCTCCCACTCTAAAGACAAGAACGCCGTGGATACTCTTCGAGTCCTAGCTTGCATACACGGTCCAACCAACATTCCCGCTGTCATCAACCTCATTGAATCAACACGTAGCACCAAAAGTTCACTCCTCAAACTTTTCATCATGCACCTTGTTGAGCTCACAGAACGTTCCTCCTCCATCATCATGGTTCAACGCGCTCGCAAAAACGGTTTCCCATTCTTCAATCGTTTCAACCGTGATGAATGGTATAACCGTCTTTCTGGTGCTTTTCAGGCATTTAGTCAATTGGGCCGAGTCATAGTCCGGTCCACTACAGCAATCTCTTCTCTTTCCACAATGCACGAGGATATATGCCACGTGGCGGAGGAAAAGAGAGTGACAATGATTATATTACCCTTCCATAAACATTGGAAGATGGAAGTAGATGATGAAAATGACAATGAGTCCCATGAGGTGTTGGAGAATGCTGGACATGGGTGGAGAGGTGTGAACCAAAGGGTACTTAAAAATGCACCTTGCTCTGTGGGTGTGCTTGTGGATAGAGGATATGGGCTTGGACCAAAGAATTTGGGCTCAGATGGAGCTGTGGCCCAAAGAATATGCCTTGTGTTTTTTGGTGGGCCTGATGATCGTGAGGTTCTAGAGTTGGGGAAGAAAATGGCTGAACACCCTGCAGTGGCAGTGACTGTTGTAAGGTTTGTTGAGGAAAATGGATTGAGTGGTAATAACTTTGTTTTACGCCAATCACCTGGCAAAAGTGCTGATGAAAACTATAGCTTTTCTGTCGCCAAAATGAACCGACAAAGAGAACAGGAGTTGGATGAAAATGCAATGGAGATGTTTCGAAGCAAGTGTGGTGAAACGGTGAAGTACATTGAAAAAGGTAGCGGCAACGTTGTGGGGGAGGTGATAGCGTTAGGCGAAAGTGCAGATTACGATCTCATAGTTGTTGGGAAGGGTCGGTTTCCATCCACTATGGTGGCGGAACTAGCAGAGAGGGAAGCAGAGCATGCAGAGTTAGGTCCCATAGGAGACATTCTAACATCCTCAACAGGACACAAGATGGTGTCATCAGTGCTTGTTATTCAACAACATGATGTGGCATTGACAGAAGATGTACCAATGTACAAAGTTAAGGTGCATGATGAGAATGTTGCAGAGGTTTCATCTGGTAGACATGAGATCTCTATAGCAAATGCAGTGTAG 2550 0.4565 MVNITSIKTSSNGVWQGDNPLDFAFPLLIVQTVLVLVVSRTLALIFKPLRQPKVIAEIVGGILLGPSALGRSKSYLHHIFPSWSLPTLESVASIGLLFFLFLVGLELDLNSIRRSGKRAFSIAACGISLPFVCGIGVAIVLRKTVDGADKAGFGQFIVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDLAAWILLALAIALAGSGTDGGDKKSPLVSVWVLLSGVGFVAFMMIVISPVMKRVAQRCSVENEAVDEVYICLTLAGVMVSGFITDFIGIHAIFGAFVFGLTIPKTGNFAERLIERIEDFVLGLLLPLYFASSGLKTDVTKISGGKAWGLLVLVISTACAGKILGTFVVAMMCRMPVRESITLGVLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPLVMAIYKPARGIAAKTIRKLGDMSSHSKDKNAVDTLRVLACIHGPTNIPAVINLIESTRSTKSSLLKLFIMHLVELTERSSSIIMVQRARKNGFPFFNRFNRDEWYNRLSGAFQAFSQLGRVIVRSTTAISSLSTMHEDICHVAEEKRVTMIILPFHKHWKMEVDDENDNESHEVLENAGHGWRGVNQRVLKNAPCSVGVLVDRGYGLGPKNLGSDGAVAQRICLVFFGGPDDREVLELGKKMAEHPAVAVTVVRFVEENGLSGNNFVLRQSPGKSADENYSFSVAKMNRQREQELDENAMEMFRSKCGETVKYIEKGSGNVVGEVIALGESADYDLIVVGKGRFPSTMVAELAEREAEHAELGPIGDILTSSTGHKMVSSVLVIQQHDVALTEDVPMYKVKVHDENVAEVSSGRHEISIANAV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04130 849 Gene3D - 533 810 - -
Trre13g04130 849 Gene3D - 27 436 IPR038770 -
Trre13g04130 849 PANTHER CATION/H + ANTIPORTER 7 814 - -
Trre13g04130 849 FunFam Cation/H(+) antiporter 15 27 438 - -
Trre13g04130 849 Pfam Sodium/hydrogen exchanger family 34 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04130 Trre-Chr13 49144315 49150539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04130 74 826 Antiporter Super Family AT3G53720 65.707 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04130 K26731 - gmx:100798644 1155.58