Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04122 ATGAAAACAAAGGTTAAATTGTCTGAGGGGTCGTCCATAGATTCTTATGGTTTGAGTTTGACCGATATTTCTGATGTGTGTGCTCATACCCATGATTATGAGTTCTTAGTTGATGTAATTGGTTATTTGACTGGTCTATCTGCTGAAAGGGAGTATATTCGTGACGGGAAGATAACTAAGATGGTCGTTGCTGAATTAACAGATCACAGTGGCAAGTGTGAAATAGCTTTATTTGGAGATTATGCTGTTGATTTGACAAAGAAGATTGATAAGTCCTCTGGTGGTTTGCCTATTGTTGTTGTACAATTTGCTAAAGTGAAAATATTTAGAGACAAAGCTTCTCTTCAAAATGTTAAGAATACCACTAGGATTTTCGTTAATCCAGATATTGCTGAGGTTGAAACCTTCAAAAACAGTCTTGCTGTTCACGGTTTTGAAGCTGAGACCAGTGTTCTTTTAATTGGTGGACCTCCTAAACCTTCTTTTGAAGAAGAATTTCTTCAGCTGCACCCGAAAATGAATGTTTCACAGCTTGATGGTTTGGATGAAGGTGGTGTGTCTGTTGTTTGTGCTGAGGTGGTTCGTTTTGTTGATGATAGTGACTGGTGGTATCCTGCTTGCAAGTGTCATAGGAGTGTTGTGGCTGACTCTGGATCATATTTTTGTAGCTCATGCGATAGGCATGTTTTTCAAGTTGTTCCAAGGTTTCGTGTGAAAGTTGAGGCAATCGGAGGTGTTGTTGATTTGGATTCTGATGGAGTTGGTGATGAAACTGATGTTGTTCTTGACTCAAAGTCTCTGGAGTTCCTAGACAATGTAATTGTTACGCCTGTTGAAGCTTGTGATAGATCTATTGTGGAAGATGAGGCTGAAGGCTCTTTAAAGGCCATTGAAGTCCGCGACAATGCAGTTCTTGCACCCCTTGAGGTTCCCCATAATTTACTTGGAGAAGATGATGCTGAAGGTTCTACTAAGAGGAATTTGTCCAAGTCATGTAGTTCTGCTCCCAAACGTCAATCAAACAAGCGTCTCAAACCTGTTAAGACTGAGAAAGAGTGA 1059 0.4013 MKTKVKLSEGSSIDSYGLSLTDISDVCAHTHDYEFLVDVIGYLTGLSAEREYIRDGKITKMVVAELTDHSGKCEIALFGDYAVDLTKKIDKSSGGLPIVVVQFAKVKIFRDKASLQNVKNTTRIFVNPDIAEVETFKNSLAVHGFEAETSVLLIGGPPKPSFEEEFLQLHPKMNVSQLDGLDEGGVSVVCAEVVRFVDDSDWWYPACKCHRSVVADSGSYFCSSCDRHVFQVVPRFRVKVEAIGGVVDLDSDGVGDETDVVLDSKSLEFLDNVIVTPVEACDRSIVEDEAEGSLKAIEVRDNAVLAPLEVPHNLLGEDDAEGSTKRNLSKSCSSAPKRQSNKRLKPVKTEKE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04122 352 MobiDBLite consensus disorder prediction 314 352 - -
Trre13g04122 352 Gene3D - 162 245 IPR012340 -
Trre13g04122 352 MobiDBLite consensus disorder prediction 326 340 - -
Trre13g04122 352 SUPERFAMILY Nucleic acid-binding proteins 18 145 IPR012340 -
Trre13g04122 352 CDD RPA1_DBD_B_like 38 140 - -
Trre13g04122 352 SUPERFAMILY Nucleic acid-binding proteins 182 241 IPR012340 -
Trre13g04122 352 Gene3D - 12 150 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04122 Trre-Chr13 49037315 49039237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04122 9 241 Core DNA Replication Machinery Family AT4G19130 21.825 1.85e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04122 - - tpra:123904946 337.035