Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04085 ATGATTAACAAAGATGTAGCAACTGATTTTGCACAGCAACCAGATGTAATATCAGTATTCATAACTGGAAAATGTACTCCCCAAACAACCAACTCATGGGTTTTCCTTGGATTTGGAAAAAAGGATAAAGTTCCCAAGGACTCATTATGGCAAAAAACATTTGGGGAAGACATAATTATTGCAAACATAGACACATCTAGATGGCGTGGAATTTGTCAAACTGACAAAGACAATTCCGATGATTTTCATTGCAATAGAAAGCTAATTGGGGCAAGGTTTTTTTCCAAAAACTACGAAAAACATGGTGGCAATGCGATTAGAAGTGCTCGTGACTTTAATGGTCATGGAACACACACTTTATCCATTGTTGGAGGAAATTTTGTTCACACAAGTGTTTTGGGCATTGCTATGAGAATGGCAAGCGGCGGATTACCGAAAGCTAGAGTTGCAGCCTACAAGGTGTTCGAGTACGAGCAAGACATATTAACTGCATTTGATCATGCCACCACTGATGGGGTTGATGTTGTTGATGTTGTTTATTATGTTGATTATGTGTTGTTTGTGGCATTGGGTTGA 576 0.3872 MINKDVATDFAQQPDVISVFITGKCTPQTTNSWVFLGFGKKDKVPKDSLWQKTFGEDIIIANIDTSRWRGICQTDKDNSDDFHCNRKLIGARFFSKNYEKHGGNAIRSARDFNGHGTHTLSIVGGNFVHTSVLGIAMRMASGGLPKARVAAYKVFEYEQDILTAFDHATTDGVDVVDVVYYVDYVLFVALG 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04085 191 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 178 IPR045051 -
Trre13g04085 191 ProSiteProfiles Serine proteases, subtilase domain profile. 32 191 - -
Trre13g04085 191 Gene3D Peptidase S8/S53 domain 65 177 IPR036852 GO:0004252|GO:0006508
Trre13g04085 191 SUPERFAMILY Subtilisin-like 45 178 IPR036852 GO:0004252|GO:0006508
Trre13g04085 191 Pfam Subtilase family 98 176 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04085 Trre-Chr13 48737824 48739762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04085 2 178 Subtilisin-like Serine Gene Family AT2G04160 44.231 4.68e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04085 - - ccaj:109807325 176.022