Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04084 ATGGTCCTAGAATATTTTCCAATGGATCACTTTGTAACTGCTCCGTGTGTGGCTAGGTTCTCGGCAAGGGGCCCGAATTCCCTTGACCCCAGAATTCTAAAGCCAGACATCACTGCACCGGGTGTTAGCATTATTGCTGCTGGTGCATCCGCAAAAACACCTTTCGTTCTAATGTCAGGTATATTAGCTCAGATGAAATTATGTGAATGGTAG 213 0.4554 MVLEYFPMDHFVTAPCVARFSARGPNSLDPRILKPDITAPGVSIIAAGASAKTPFVLMSGILAQMKLCEW 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04084 70 SUPERFAMILY Subtilisin-like 11 60 IPR036852 GO:0004252|GO:0006508
Trre13g04084 70 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 60 IPR045051 -
Trre13g04084 70 Gene3D Peptidase S8/S53 domain 13 52 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04084 Trre-Chr13 48735126 48735448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04084 17 60 Subtilisin-like Serine Gene Family AT4G10540 60.417 1.94e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04084 - - vun:114175516 63.1586