Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04057 ATGGAATCCAAAATTCAATTCTTTTTCTTCACCCTTTTTCTTCTCATTCTCACTATCCATGCACAAACTCTTGGAACTTACATTGTTCAGTTACACCCTCATGGCACAACCAAGTCTTTGTTTGCCACCAAACTCAAATGGCATCTTTCATTCATACAACAAACCATTTCCTCTGATGGGGATCCTTCTTCACGCCTTCTATACTCTTACCGTTCTGCCATGGACGGTTTCGCAGCTCAGTTAACTGAGACTGAGCTTGAGTACTTGCAAAAACATCCTGATGTTATCTCAATTAGGCCTGATAGGCAGCTTCAAATTCAAACCACCTATTCTTACAAGTTCTTAGGACTCAATGCTGCAAGAGAAAATGGTTGGTATCAAGCTGGTTTCGGCAGTGGGACCATAATCGGGGTGCTTGATACTGGTGTTTGGCCCGAAAGTCCTAGCTTCAATGATCATGATATGCCTCCAGTTCCTAAGAAATGGAAGGGTATATGCCAATCAGGAAAAGCTTTTAACTCTTCCAATTGTAACAGAAAGCTCATTGGTGCACGGTACTTCACAAAAGGCCATTTTGCAGTATCACCTACAAGAATTCCAGAATATCTCTCCCCAAGAGACTCATCTGGACATGGAACGCACACTTCATCCACTGCTGGTGGAGTTCCGGTGCCGATGGCGAGTGTTTTTGGTTATGGAAAAGGTGTGGCAAGAGGTATGGCTCCTGGTGCTCATATTGCAGTGTACAAAGTATGCTGGTTCAATGGCTGTTATAACTCTGACATCATGGCTGCAATGGATGTGGCAATCAGAGATGGCGTGGACGTTCTATCCTTGTCTCTTGGTGGTTTTCCGGTACCTCTATATGATGATAGTATTGCCATTGGAAGCTTTAGAGCAATGGAGAAAGGGATTTCGGTTATATGTGCAGCAGGAAACAACGGTCCAATGGCAATGTCAGTTGCCAACGACGCTCCTTGGATTGCCACTATTGGCGCAAGCACACTCGACAGGAAATTCCCGGCAATAGTTCGCATGGGTAATGGAAAAGTTCTCTATGGAGAATCCATGTATCCAGTGAACAACAGATTAGCAAGCAATAGCAAAGAACTTGAGTTGGTTTACCTGAGTGGTGGAGATAGTGAGAGTCAATTTTGCCTCAAAGGGTCTCTTCCAAAGGACAAAGTTCAAGGCAAAATGGTGGTATGCGATCGAGGTGTCAACGGAAGATCAGAAAAGGGTCAAGCTGTGAAGGAAGCAGGTGGTGCTGCTATGATCTTAACAAACACAGAGCTAAACTTAGAAGAAGATTCGGTCGATGTTCATCTTTTGCCTGCAACATTGGTAGGATTTGATGAATCAGTCATCTTGAAATCTTACATAAACTCCACAACAATGCCACTTGCTAGGATTGAATTTGGAGGAACTGTAATAGGGAAGTCTAGAGCACCAGCAGTAGCAATATTCTCAGCTAGAGGACCAAGTTTCACAAACCCTTCAATCCTTAAACCAGATGTTATAGCTCCAGGAGTCAACATCATTGCTGCATGGCCTCAAAACCTTGGTCCTACAGGCCTACCAGAGGACACTAGAAGAGTGAACTTCTCTGTCATGTCAGGTACATCAATGTCATGTCCTCATGCTAGTGGAATTGCAGCTCTTATCCGTTCCGCTCACAAAAAATGGAGCCCTGCAGCTATTAAATCTGCAATGATGACAACAGCAGACGTAATCGACCACACAGGAAAACCGATACTCGATGAAGACAAACCAGCTACTTCTTTTGCAATGGGAGCTGGAAATGTGAATCCACAAAGAGCATTGAATCCAGGACTGATATACGATATCAAGCCAGATGATTACGTCAACCACCTTTGCAGCATTGGTTATACAAAATCAGAAATATTCAGTATCACACACCGAAACGTAAGCTGCCATACAATCATGCAGATGAATAGAGGCTTCAGCCTTAACTATCCCTCAATCTCAGTAATATTTACGGACGGAATGAGAAGGAAAATGTTCAGCAGGAGGGTAACAAATGTGGGAAGTCCTAACTCCATCTACTCAGTGGAGGTTATGGCACCTCAAGGAGTAAAAGTAATAGTGAAACCCAAGAAACTAGTATTCAAACAAATAAATCAAAGCTTGAGCTACAGGGTTTGGTTCATATCAAGAAAAAAAGTCAAAAAAGGCGACGATAACATGAACTTCGCAGAAGGACATTTAACATGGATAAATTCACAAAATGGTTCTTACAGAGTTAGAAGTCCTATATCAGTGAGTTGGAAAGCTAAGTAG 2301 0.4281 MESKIQFFFFTLFLLILTIHAQTLGTYIVQLHPHGTTKSLFATKLKWHLSFIQQTISSDGDPSSRLLYSYRSAMDGFAAQLTETELEYLQKHPDVISIRPDRQLQIQTTYSYKFLGLNAARENGWYQAGFGSGTIIGVLDTGVWPESPSFNDHDMPPVPKKWKGICQSGKAFNSSNCNRKLIGARYFTKGHFAVSPTRIPEYLSPRDSSGHGTHTSSTAGGVPVPMASVFGYGKGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDVLSLSLGGFPVPLYDDSIAIGSFRAMEKGISVICAAGNNGPMAMSVANDAPWIATIGASTLDRKFPAIVRMGNGKVLYGESMYPVNNRLASNSKELELVYLSGGDSESQFCLKGSLPKDKVQGKMVVCDRGVNGRSEKGQAVKEAGGAAMILTNTELNLEEDSVDVHLLPATLVGFDESVILKSYINSTTMPLARIEFGGTVIGKSRAPAVAIFSARGPSFTNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDTRRVNFSVMSGTSMSCPHASGIAALIRSAHKKWSPAAIKSAMMTTADVIDHTGKPILDEDKPATSFAMGAGNVNPQRALNPGLIYDIKPDDYVNHLCSIGYTKSEIFSITHRNVSCHTIMQMNRGFSLNYPSISVIFTDGMRRKMFSRRVTNVGSPNSIYSVEVMAPQGVKVIVKPKKLVFKQINQSLSYRVWFISRKKVKKGDDNMNFAEGHLTWINSQNGSYRVRSPISVSWKAK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04057 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 107 IPR037045 -
Trre13g04057 766 FunFam Subtilisin-like protease SBT1.5 133 348 - -
Trre13g04057 766 CDD PA_subtilisin_like 344 471 - -
Trre13g04057 766 Pfam Fibronectin type-III domain 657 761 IPR041469 -
Trre13g04057 766 FunFam subtilisin-like protease SBT1.5 337 478 - -
Trre13g04057 766 ProSiteProfiles Serine proteases, subtilase domain profile. 109 608 - -
Trre13g04057 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 761 IPR045051 -
Trre13g04057 766 CDD Peptidases_S8_3 104 576 IPR034197 -
Trre13g04057 766 SUPERFAMILY PA domain 347 435 IPR046450 -
Trre13g04057 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Trre13g04057 766 FunFam Subtilisin-like protease SBT1.9 16 107 - -
Trre13g04057 766 Pfam PA domain 372 452 IPR003137 -
Trre13g04057 766 Gene3D Peptidase S8/S53 domain 133 621 IPR036852 GO:0004252|GO:0006508
Trre13g04057 766 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Trre13g04057 766 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Trre13g04057 766 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Trre13g04057 766 SUPERFAMILY Subtilisin-like 107 612 IPR036852 GO:0004252|GO:0006508
Trre13g04057 766 SUPERFAMILY Protease propeptides/inhibitors 27 106 - -
Trre13g04057 766 Gene3D - 337 478 - -
Trre13g04057 766 Gene3D - 625 763 - -
Trre13g04057 766 Pfam Peptidase inhibitor I9 26 106 IPR010259 -
Trre13g04057 766 Pfam Subtilase family 131 600 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04057 Trre-Chr13 48479964 48482264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04057 1 764 Subtilisin-like Serine Gene Family AT1G04110 66.881 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04057 - - psat:127125979 1394.79