Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04052 ATGATCATTAATGAAACACTTCGGCTTTATCCTCAAGCTGCGATGCTAATGAGGCAAACTGCTAAAAATGTGATGCTAGGGAGCATTGAAGTTCCTGCAAAGACTCAACTCTCCATAGCTTTAACTGCTGTTCATCATGACAGTGAAATCTGGGGAGAAGATTGTCACGAGTTTAAACCATCAAGATTTAGCGAGCCTCGGAAGCATTTAGCAGCATTCTTTCCGTTTGGTTTAGGGCCTCGCAACTGTGTTGGACAAAATTTGGCATTGGTTGAGGCAAAGGTCGCTCTAGCTTTGATTATTCAAAGTTATAGTTTTGTAGTATCTCCAAGCTATATACATGCTCCTATACAACTTATAACTTTGCAGCCTCAACATGGTGCACAAATAATCTTCAGAAGGATTTCAGGTTGA 414 0.4058 MIINETLRLYPQAAMLMRQTAKNVMLGSIEVPAKTQLSIALTAVHHDSEIWGEDCHEFKPSRFSEPRKHLAAFFPFGLGPRNCVGQNLALVEAKVALALIIQSYSFVVSPSYIHAPIQLITLQPQHGAQIIFRRISG 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04052 137 PRINTS E-class P450 group I signature 83 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04052 137 PRINTS E-class P450 group I signature 73 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04052 137 SUPERFAMILY Cytochrome P450 1 134 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04052 137 Gene3D Cytochrome P450 1 134 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04052 137 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 76 85 IPR017972 GO:0005506|GO:0016705
Trre13g04052 137 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 128 - -
Trre13g04052 137 PRINTS P450 superfamily signature 1 11 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04052 137 PRINTS P450 superfamily signature 74 83 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04052 137 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04052 137 Pfam Cytochrome P450 1 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04052 Trre-Chr13 48461856 48462269 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04052 1 136 Cytochrome P450 AT1G75130 58.824 1.93e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04052 - - mtr:11418505 230.335