Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04050 ATGAATCACATATTTGTTGTTACTATTGTTGTTTTTGTTTTTCTGTATTACTTTCTCAAAACTCTTAACTCAATTTTCTGGGTCCCATACAAAATCCAACGACACTTCCGCAACCAAGGTATATCCGGTCCTATCTACCGTCCGATCTTTGGAAACTCATCACAGATCAAACGGTTCAACGCAGAAACTAAATCAGACGCGAACCAATTCAACCATGACATCTTAAAACGTGTGGTTCCATTCTACAACATATGGTCTTGCATGTATGGGAAAACTTTCCTTTATTGGTTCGGGTCAACGCCCCGGTTGGCTATATCCGACCCGGATATGATCAAGGAAGTGTTGGTTACTAAATGTGGAGAGTATGGGAGGATTCCCTACAACCCACAAGCCAAATTGCTTTATGGACAAGGACTTCCAGGTTTGCAAGGTGATCAATGGAATTTTCATAGAAGGATCATCAACTTGGCATTTAACATGGAGCTTGTTAAGGGATGGGTGCCAGATATTGTGGCAAGTGTGACAAAGATGCTGGAAAAATGGGAAAATGAAAGAGGTGGAAGAAATGAATTTGAAATAGATGCGTACAGAGAGCTTCACGATCTTTCTGCAGATGTTATATCAAGGACTGCTTTTGGAAGCAGTTATGAAGAAGGCAAGCATATTTTCAAATTACAGGAGCAGCAAATGCATCTTTTCTCGCAGGCTGTTAGAAGTGTCTATATTCCTGGATTTAGATATTTGCCGACAAAGAAGAATAGGGATAGATGGAGACTAGATAAAGAGACGCGTGAGTCAATTCGCAAGCTGATTGAGACCAAGAGCAATGTTAGAGACAATAACAAAAATGTACTAAATTCATTAATGGGTTCCTACAAGAATGAAGTTGGTGGAGACGACAAATTAGGGTTGGAAGAGATTATAGATGAATGTAAAACCATCTACTTTACTGGAAAGGATACAACAGCTAATTTGTTGACTTGGGCAGTTCTTCTTTTAGCAAAACATGGAGAATGGCAAAGTAAGGCGCGCGAAGAAATTTTTCGTGTTATTGGACACAATCAACTTCCTGTTGCAAACAATTTAAATGACTTCAAGATTGTTAGTATGATCATTAATGAAACACTTCGGCTTTATCCTCAAGCTGCGATGCTAATGAGGCAAACTGCTAAAAATGTGATGCTAGGGAGCATTGAAGTTCCTGCAAAGACTCAACTCTCCATAGCTTTAACTTCTGTTCATCATGACAGTGAAATTTGGGGAGAAGATTGTCACGAGTTTAAACCATCAAGATTTAGCGAGCCTCGGAAGCATTTAGCAGCATTCTTTCCGTTTGGTTTAGGGCCTCGCAACTGTGTTGGACAAAATTTGGCATTGGTTGAGGCAAAGGTCGCTCTAGCTTTGATTATTCAAAGTTATAGTTTTGTAGTATCTCCAAGCTATATACATGCTCCTATACAACTTATAACTCTGCAGCCTCAACATGGTGCACAAATAATCTTCAGAAGGATTTCAGGTTGA 1521 0.3951 MNHIFVVTIVVFVFLYYFLKTLNSIFWVPYKIQRHFRNQGISGPIYRPIFGNSSQIKRFNAETKSDANQFNHDILKRVVPFYNIWSCMYGKTFLYWFGSTPRLAISDPDMIKEVLVTKCGEYGRIPYNPQAKLLYGQGLPGLQGDQWNFHRRIINLAFNMELVKGWVPDIVASVTKMLEKWENERGGRNEFEIDAYRELHDLSADVISRTAFGSSYEEGKHIFKLQEQQMHLFSQAVRSVYIPGFRYLPTKKNRDRWRLDKETRESIRKLIETKSNVRDNNKNVLNSLMGSYKNEVGGDDKLGLEEIIDECKTIYFTGKDTTANLLTWAVLLLAKHGEWQSKAREEIFRVIGHNQLPVANNLNDFKIVSMIINETLRLYPQAAMLMRQTAKNVMLGSIEVPAKTQLSIALTSVHHDSEIWGEDCHEFKPSRFSEPRKHLAAFFPFGLGPRNCVGQNLALVEAKVALALIIQSYSFVVSPSYIHAPIQLITLQPQHGAQIIFRRISG 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04050 506 Pfam Cytochrome P450 85 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 497 - -
Trre13g04050 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Trre13g04050 506 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04050 506 SUPERFAMILY Cytochrome P450 43 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04050 Trre-Chr13 48448859 48451698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04050 24 505 Cytochrome P450 AT1G75130 52.990 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04050 - - mtr:11418505 862.062