Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04049 ATGAATCACTTACTTCTTCTTGTTACCATATTCGAACAGGTCAGCATGATAATTAGTGAAACACTTCGGCTCTATCCTCCAGGTGCAATGCTAACAAGGCAAACCGTTAAAAATGTGATAATTGGAAGCATCGAAGTTCCTGCAAAGACGCAAATCTACTTGGCATTGACCGCTGTTCACCATGAGAAAGAAATATGGGGACAAGATTGTCATGAGTTTAACCCAATGAGATTTCGTGAGCCTCGGAGGCATTTGGCAGCATTTATTCCTTTTGGATTAGGGCCTCGAATTTGTGTTGGGCAAAATTTGGCATTGGCTGAGGCAAAAATAGCTCTTGCTTTGATTATTCAACGTTATAGTTTTGTCGTATCTCCAAGTTATATACATGCTCCTGTACTATTTATAACTTTGCAGCCTCAACATGGTGCACAAATCTTCTTCAAAAAGATTTCATATTGA 459 0.3922 MNHLLLLVTIFEQVSMIISETLRLYPPGAMLTRQTVKNVIIGSIEVPAKTQIYLALTAVHHEKEIWGQDCHEFNPMRFREPRRHLAAFIPFGLGPRICVGQNLALAEAKIALALIIQRYSFVVSPSYIHAPVLFITLQPQHGAQIFFKKISY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04049 152 PANTHER CYTOCHROME P450 FAMILY MEMBER 13 143 - -
Trre13g04049 152 SUPERFAMILY Cytochrome P450 14 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04049 152 PRINTS E-class P450 group IV signature 82 98 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04049 152 PRINTS E-class P450 group IV signature 98 116 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04049 152 PRINTS E-class P450 group IV signature 11 27 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04049 152 PRINTS P450 superfamily signature 16 27 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04049 152 PRINTS P450 superfamily signature 98 109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04049 152 PRINTS P450 superfamily signature 89 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04049 152 Gene3D Cytochrome P450 11 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04049 152 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 91 100 IPR017972 GO:0005506|GO:0016705
Trre13g04049 152 Pfam Cytochrome P450 15 125 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04049 Trre-Chr13 48446414 48446872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04049 5 151 Cytochrome P450 AT1G75130 56.463 7.67e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04049 - - mtr:11418505 230.72