Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g04046 ATGAAAACTGTTGAAAGAGGAGGAATAGATGAATTTGAAATAGATGTGCACAAAGAGCTTCATGAACTTTCTGCAGAAATTATATCAAGGACAGCTTTTGGCTGCAGTTATGAAGAAGGCAAGCATATTTTCAAATTACAGGAGCAGCAAATGCATCTTTTCTCACAGGCAGTTAGAAGTATATATATTCCAGGATTTAGATATTTGCCGACTAAGAAGAACAGGGATAGATGGAGACTAGATAAAGAGACGCGTGAATCAATTTGTAAGCTGATTAAGACCAAGAGTAATGTCAGAGAAAATACCAAAAATGTACTAAATTCATTAATGGGTTCCTACAAGAATGAAGTTGGAGGAGAAGACAAATTAGGGTTGGAAGAAATTATAGATGAGTGTAAAACTATATACTTTGCTGGAAAGGATACAACAGCTAACTTGTTGACATGGGCGCTTCTTCTTTTGGCCAAACATCAAGAATGGCAAAGTAAAGCACGCGAAGAAGTTCTTCGTGTCATTGGACACAATCGACTTCCAGTTGCAGAAAATTTAAATGATTTTAAGATTGTCAGCATGATAATTAATGAAACGCTTCGGCTTTATCCTCCAGCTTTGATGCTAACAAGGCAAACCGCTAAAAATGTGAGGATAGGGAGCATTGAAGTTCCTGCAAAGACTCAACTCTACTTGTCATTGACCGCTGTTCATCATGACAAAGAAATCTGGGGACAAGATTGTCACGAGTTTAATCCAATGAGATTTAGCGAGCCTCGGAAGCATTTAGCAGCATTCTTTCCTTTTGGCTTGGGGCCTAGAACTTGTGTTGGGCAAAATTTGGCATTGGTTGGGGCAAAAATAGCTCTTGCGTTGATTATTCAACGTTATAGTTTTGTCGTATCTCCAAGCTATATACATGCGCCTATACTATTTATAACTTTGCAGCCTCAACATGGTGCACAAATCTTCTTCAAAAGGATTTCTTATTGA 984 0.3801 MKTVERGGIDEFEIDVHKELHELSAEIISRTAFGCSYEEGKHIFKLQEQQMHLFSQAVRSIYIPGFRYLPTKKNRDRWRLDKETRESICKLIKTKSNVRENTKNVLNSLMGSYKNEVGGEDKLGLEEIIDECKTIYFAGKDTTANLLTWALLLLAKHQEWQSKAREEVLRVIGHNRLPVAENLNDFKIVSMIINETLRLYPPALMLTRQTAKNVRIGSIEVPAKTQLYLSLTAVHHDKEIWGQDCHEFNPMRFSEPRKHLAAFFPFGLGPRTCVGQNLALVGAKIALALIIQRYSFVVSPSYIHAPILFITLQPQHGAQIFFKRISY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g04046 327 PRINTS P450 superfamily signature 273 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PRINTS P450 superfamily signature 264 273 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PRINTS P450 superfamily signature 138 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PRINTS P450 superfamily signature 191 202 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 SUPERFAMILY Cytochrome P450 13 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 Pfam Cytochrome P450 13 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 318 - -
Trre13g04046 327 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 266 275 IPR017972 GO:0005506|GO:0016705
Trre13g04046 327 Gene3D Cytochrome P450 2 325 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PRINTS E-class P450 group I signature 23 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PRINTS E-class P450 group I signature 147 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PRINTS E-class P450 group I signature 273 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PRINTS E-class P450 group I signature 127 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g04046 327 PRINTS E-class P450 group I signature 263 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g04046 Trre-Chr13 48431683 48433294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g04046 6 326 Cytochrome P450 AT1G75130 58.255 1.08e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g04046 - - mtr:11418505 577.785