Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03958 ATGGCAAAAGAACAAATTCAGGTCCTAAATGCACTTGATGTGGCTAAAACACAATGGTATCATTTCACTGCAATCGTCATAGCTGGTATGGGATTCTTCACTGATGCATATGATTTGTTCTGTATATCCCTTGTTACCAAGTTGCTCGGCCGCATATACTACCACGTTGAGGGTGCGGCAAAGCCCGGTACATTGCCACCCAATGTATCAGCTGCTGTAAATGGTGTTGCTTTCATTGGAACACTTTTAGGGCAGCTTTTCTTTGGCTGGCTTGGGGATAAGATGGGAAGAAAAAAAGTTTACGGCATGACCCTCATGACGATGATAATCTGCTCCGTTTGTTCTGGCCTTTCTTTCGGACACACTCCAAAATCTGTTATGTCAACTCTTTGCTTCTTCCGCTTTTGGCTTGGGTTCGGTATTGGTGGAGACTACCCTCTTTCCGCTACCATAATGTCAGAGTATTCTAATAAGAAGACTCGAGGCGCCTTCATTGCTGCAGTATTTGCCATGCAAGGTTTTGGAATTTTGGGAGGAGGTATATTTGCAATCATAATTTCAGCGGCGTTCAGTAATTGGTTTGACGCACCATCATATGCGGTCGATCCAGTTCGGTCAACTGTTCCACAAGCAGACTATATGTGGAGGATAATTGTGATGGTCGGAGCAATCCCAGCAGCAATGACTTACTATTCGCGGTCGAAGATGCCAGAAACCGCTCGTTACACTGCTTTAGTTGCTAAGAACACGAGTCAGGCTGCAGCAGATATGTCTAAGGTTCTGCAGGTTGAGATTCAAGCTGAAGAGGTGAAAGAGGAGCCAGAAAAGACTAAATCATATGGCTTGTTCTCCAAAGAGTTCCTCAGTCGACATGGTATGCATCTACTTGGTACAACAAGCACTTGGTTCTTGCTTGATATAGCATTTTACAGCCAAAATCTCTTCCAGAAAGATATTTTCAGCGCGGTTGGTTGGATACCTGCTCCACAAACCATGAATGCAATTGACGAGGTTTACAAAATTGCGAGAGCTCAAACGATTATTGCTCTATGCAGTACAGTTCCAGGCTACTGGTTTACGGTGGCTCTCATCGACAGAATGGGGAGATTTAAAATCCAATTGATGGGATTCTTCTTTATGACCGTCTTCATGTTTTCGCTTGCTATTCCTTATGAACACTGGACTCATAAGGACAACAGAATAGGATTTGTGGTGATGTATTCCTTAACTTTCTTCTTTGCAAATTTTGGGCCTAATGCTACAACATTTGTTGTGCCGGCAGAGATTTTCCCTGCTAGATTCCGATCCACTTGCCACGGAATATCATCCGCATCAGGGAAGCTTGGAGCTATGGTTGGTGCATTTGGATTCTTGTATTTGGCACAAAACCAAGACAAGAGTAAAGCTGATGCAGGATACCCTGCTGGTATTGGTGTGAAGAATTCACTGATGCTCTTAGGTGTTTGTAACATTTTGGGATTCTTGTGTACTTTCATGGTACCGGAGGCAAATGGAAAATCTTTAGAGGAGATGTCAGGTGAGAATGATGACGAAGACCAAAGGATAGGAGATGTAGAGAAGCCTCATCATGCTTCCAACAACGGCATTGTTATTCCATAA 1620 0.4352 MAKEQIQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGAAKPGTLPPNVSAAVNGVAFIGTLLGQLFFGWLGDKMGRKKVYGMTLMTMIICSVCSGLSFGHTPKSVMSTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIIISAAFSNWFDAPSYAVDPVRSTVPQADYMWRIIVMVGAIPAAMTYYSRSKMPETARYTALVAKNTSQAAADMSKVLQVEIQAEEVKEEPEKTKSYGLFSKEFLSRHGMHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPAPQTMNAIDEVYKIARAQTIIALCSTVPGYWFTVALIDRMGRFKIQLMGFFFMTVFMFSLAIPYEHWTHKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKSKADAGYPAGIGVKNSLMLLGVCNILGFLCTFMVPEANGKSLEEMSGENDDEDQRIGDVEKPHHASNNGIVIP 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03958 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 503 - -
Trre13g03958 539 FunFam Inorganic phosphate transporter 1-6 20 526 - -
Trre13g03958 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Trre13g03958 539 MobiDBLite consensus disorder prediction 508 539 - -
Trre13g03958 539 Pfam Sugar (and other) transporter 25 512 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre13g03958 539 NCBIfam phosphate:H+ symporter 11 514 IPR004738 GO:0005315|GO:0006817|GO:0016020
Trre13g03958 539 CDD MFS_PhT 25 502 - -
Trre13g03958 539 SUPERFAMILY MFS general substrate transporter 12 512 IPR036259 -
Trre13g03958 539 Gene3D MFS general substrate transporter like domains 20 528 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03958 Trre-Chr13 47808377 47809996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03958 1 513 Inorganic Solute Cotransporters AT2G38940 83.333 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03958 K08176 - gmx:100803626 915.99