Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03949 ATGACCGGAAACCGCCGTATCCAATGGCTTTCCGACATCGTCCAAATCGCACCGTCCGCCACTTTCCGTCTCGACCGACCACTAGGCACCCGCCAAATCATCACCGGAAACCCATCCAACGTTCAACATATACTCAAAAACCAATTCAACAATTACCAAAAAGGCACACGTTTCACAAACACTCTCTCCGATTTCTTAGGAAACGGAATTTTCAACACAAACGGTGAAAATTGGAAGTTTCAAAGACAATTAGCAAGTCACGAATTCAACACGAAATCACTTCGTAATTTCGTCGAACACATAGTCGACACAGAACTCACCAACCGTTTAATCCCAATCCTAAACTCATCCTCTCAAACAAACGAAACACTCGATTTTCAGGACATTCTTCAACGTTTTACGTTTGATAATATCTGTAAAATCGCGTTTGGTTTTGATCCAGAGTATTTAACACCGTCAACTAACAGAACGAAATTCGCACAAGCTTTTGAAGATGCAAATGAAATTAGCAGCAAACGTTTCCGTTTAGCTTTACCAATAATCTGGAAGTTGAAAAGACGCTTCAACATCGGTTCAGAAAAGCGTCTTCGAGAAGCTGTTAAAGAAGTGCACGAATTCGCGAGGAAAATAATTCGTGACAAAAAACAAGAACTGCACGAAAATTCAACTATCCAATCAGAAGATATGTTATCGCGTTTTTTAAGTTCGGGTCATTCGGAAGAAGATTTCGTGACGGATATTATAATTAGTTTTATTTTAGCGGGTAAAGATACAACTTCAGCTGCGCTGACGTGGTTTTTTTGGTTATTATGGAAAAATCCACGTGTCGAGGAGGAAATTTTGAAGGAAATAAATATGAAATCTGAAACGTTCGATTATAATGAAGTGAAGGAAATGGTTTATACACATGCTGCGCTTAGCGAGAGTATGAGATTGTATCCACCTGTACCAATGGATAGTAAAGAAGCCGTAAACGACGATGTTTTACCGGATGGAACGGTTGTGGAGAAGGGTACTATGGTAACTTATCATGTGTATGCGATGGGGAGGATGCCGAGTTTATGGGGGGAGGATTGGGCCGAGTTTAGGCCAGAGAGGTGGTTGGAGAAAGATCGAGTGAGTGGAAAATGGGCTTTTGTGGGGAAAGATTCATTTACTTATCCTGTTTTTCAGGCTGGGCCTAGGATTTGTTTGGGAAAAGAAATGGCTTTTATGCAAATGAAAAGGATTGTTGCTGGGATTGTTGGGAAGTTTAAGGTTGTTCCTGTGCCTCATTTGAATGAACATCCTAATTTCATTTCATTTTTGAGTTCACAGATGGAAGGGAACATAAACCCTAAAAATAATATCTTGCCGTTTCAGGCACAGTAG 1371 0.4055 MTGNRRIQWLSDIVQIAPSATFRLDRPLGTRQIITGNPSNVQHILKNQFNNYQKGTRFTNTLSDFLGNGIFNTNGENWKFQRQLASHEFNTKSLRNFVEHIVDTELTNRLIPILNSSSQTNETLDFQDILQRFTFDNICKIAFGFDPEYLTPSTNRTKFAQAFEDANEISSKRFRLALPIIWKLKRRFNIGSEKRLREAVKEVHEFARKIIRDKKQELHENSTIQSEDMLSRFLSSGHSEEDFVTDIIISFILAGKDTTSAALTWFFWLLWKNPRVEEEILKEINMKSETFDYNEVKEMVYTHAALSESMRLYPPVPMDSKEAVNDDVLPDGTVVEKGTMVTYHVYAMGRMPSLWGEDWAEFRPERWLEKDRVSGKWAFVGKDSFTYPVFQAGPRICLGKEMAFMQMKRIVAGIVGKFKVVPVPHLNEHPNFISFLSSQMEGNINPKNNILPFQAQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03949 456 Pfam Cytochrome P450 29 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 Gene3D Cytochrome P450 5 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS E-class P450 group I signature 243 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS E-class P450 group I signature 263 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS E-class P450 group I signature 303 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS E-class P450 group I signature 387 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS E-class P450 group I signature 397 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS P450 superfamily signature 388 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PRINTS P450 superfamily signature 254 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 PANTHER CYTOCHROME P450 5 442 - -
Trre13g03949 456 SUPERFAMILY Cytochrome P450 27 434 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g03949 456 CDD CYP86A 21 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03949 Trre-Chr13 47696375 47704730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03949 4 447 Cytochrome P450 AT5G63450 49.888 1.90e-152 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03949 K20769 K13407 ag:AAD10204 764.607