Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03826 ATGTCAAGAGAGGTTGATCTCATCAAGGACGTTGGTGATGGCCAGGAGCTATGGAAACTGGCTGTTAGAGTTGAAGATCTCTGGAAAAGTGGTATTGGAAAGAATGAACACATCGAGTTCCTTATTCTTGACAAACAGGGAGACAACATTCAAGTGTTACTTCCCGCAGATCTGTGTCCTACTTGGGGGCCAAAACTGAGTGAAGGAAGTACATATATAATGAAAAATTTTAAGGTACAAAATAATGAGTTTGGTGTTAAGTTTTGTGATCATCCCTTTATGCTGGTAATGGTCGGAGGTGAACGTGGGTCAAAGGTCGAACCAACTAAACTTCCTGATATCCCCAAATATTCTCTGAAATTCAAACCTTTTCCTGATATTACAAGTGGGAAGTTTACCTTTTATCAACGCTTCTTTTTTCATACATTCACAAATGCTATTGGTGCTGTCTATGAGGTTGCTGCTGAAAAAAAAAGCTTCGGTTCAAAAAAGTTTCCCACTATTGTTTCTTTAGCTGATGCAGAGATGAACATTGTTACAGCAACCCTGTGGGACAAATTTCAAACTGAATTTTTAACTAAATATAGGGAACTTCAAGGTGCTAAACCAGTCATTGTCATTATCAAACATGGTAAAATCAAAGAACCACAAGGAGTTTATGATTTGACCATTTCAAATGCATGGAATGGGACAAAATTAATCATGGATCAAGATCTTCCAGAAATTAAGGAATTCCTAACTAGATTACCTCATGACTTTATTGCTCAATCAATTAGTTCATTGAACAATGTTGATGGTAATGCTATGGTTACACAAAACTCAATGGGGTCCCAATATTCATCAGGAAGCCGCTATACATTTAAAGCTCCTGCAACTCACATATCTGAATTGCTATCACTGCCTGATGAGGAAATTGTAACAACTGTTGCCACTACTCACCATGTTTGTGTTTCCAAAAATGGGTGGTTTTACTTATCATGTGCTGAATGTCCTAAAGCTCTGATTACTGATACTCCTCCTTTTCAGTGTAAAACAAAGGAGCATGCTACCCTTAACCCTTTAATCAAGTACAGGATTGAAGTTGAGGTTCGTTATGAACGTCATAAAGCCAAATTTCTGTTCTGGGACCGTGAGTGTGCCGAACTCATTGGAAAAACTGCTTCTGAAGTGAAAGAAATTATGATTAAGGCTGGTGCTTTTGGTCTACACGAATACCCTAAAATACTGGATGATATGATGGGAAAAGAGTTAGCTCTTAAAGTGAAGGTCCAATCTAAGGCTAAAATGTGTAATGTCCTCACCTGTAAGAGTGATCCTGAAATCATTAATCATATCAAAGACATGATTAAACCAATTGAGAATGAATCTCCACTTTCTTTACTTCCTCCAAATTTTGCTGATGGAACTTCTTCATTTCCTACCTTTCCTACTCAAGATCTAACTGATAGCCAAGAATCTGAATGTGACTCGATCAAAAATCAAACTCCTTCAAAGATGCAGGTGGAAGATTATTCCACTCATGAACCACAATCTGACTTCATCAAAAGTCAAACTCCTTCAAAGATGCAAGTGGAAGATTATTCCACTCATGAACCTCAATCTGACTTCATCAAAACTCAAACTCCTTCAAAGAGGACTGTGGGAGATTCTGGAGCAAATGAACCAGAATCAGGAAAACTTTCTTCAACCAGGATTAGGCTAAGGAGTGTAATCAAGAAGGAAAAATCAGGTCTGCCTCCTGCTATCTAG 1749 0.3808 MSREVDLIKDVGDGQELWKLAVRVEDLWKSGIGKNEHIEFLILDKQGDNIQVLLPADLCPTWGPKLSEGSTYIMKNFKVQNNEFGVKFCDHPFMLVMVGGERGSKVEPTKLPDIPKYSLKFKPFPDITSGKFTFYQRFFFHTFTNAIGAVYEVAAEKKSFGSKKFPTIVSLADAEMNIVTATLWDKFQTEFLTKYRELQGAKPVIVIIKHGKIKEPQGVYDLTISNAWNGTKLIMDQDLPEIKEFLTRLPHDFIAQSISSLNNVDGNAMVTQNSMGSQYSSGSRYTFKAPATHISELLSLPDEEIVTTVATTHHVCVSKNGWFYLSCAECPKALITDTPPFQCKTKEHATLNPLIKYRIEVEVRYERHKAKFLFWDRECAELIGKTASEVKEIMIKAGAFGLHEYPKILDDMMGKELALKVKVQSKAKMCNVLTCKSDPEIINHIKDMIKPIENESPLSLLPPNFADGTSSFPTFPTQDLTDSQESECDSIKNQTPSKMQVEDYSTHEPQSDFIKSQTPSKMQVEDYSTHEPQSDFIKTQTPSKRTVGDSGANEPESGKLSSTRIRLRSVIKKEKSGLPPAI 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03826 582 Gene3D - 3 102 IPR012340 -
Trre13g03826 582 MobiDBLite consensus disorder prediction 463 564 - -
Trre13g03826 582 SUPERFAMILY Nucleic acid-binding proteins 302 425 IPR012340 -
Trre13g03826 582 CDD RPA1_DBD_A_like 19 95 - -
Trre13g03826 582 Gene3D - 112 253 IPR012340 -
Trre13g03826 582 SUPERFAMILY Nucleic acid-binding proteins 5 97 IPR012340 -
Trre13g03826 582 CDD RPA1_DBD_B_like 145 250 - -
Trre13g03826 582 SUPERFAMILY Nucleic acid-binding proteins 120 254 IPR012340 -
Trre13g03826 582 Gene3D - 269 453 IPR012340 -
Trre13g03826 582 MobiDBLite consensus disorder prediction 459 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03826 Trre-Chr13 46392805 46395466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03826 1 398 Core DNA Replication Machinery Family AT5G08020 20.773 8.86e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03826 - - tpra:123884216 288.885