Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre13g03814 | ATGCAAACTAGTACAATGAAAACAGAAAGAAGAAAAAACAAACGCTTCAATTATCTTTGTTTCTCAACTTTCATACACCCTTTCACTCCTCCTTCATCATCTCTTCTTCAAAATCAACAACAAATTGATCACAACCGTCCATCTCTCTCCACCGCTTCCGCCACGTCATCATCATCATTCATGATCAAAAACTTCAACACTCTCTACCAAAACCATAACCAAATCACCGAACCTGATTCCGAACCTCAACCCGAACCTCAACTTGCTGATTTCGCAACCGCCTTTGCCTCTAACCGTTTCTTTTTCTCTTCCCCCGGTCGTTCCAACTCCATCGTTGAATCTTCCTCTTCTTCCTCTTCATCCTCGTCGTTAACAGCCACCGTGCCGCCGCCGGTGAATGATTCCGATAACTACAAAAACAAAGCAATTTTCAACGGAAGTGTTGCCGTGCCAACTTACTCGCCGGATCCTTACATGGATTTCCGGCGGTCAATGCAAGAAATGGTGGAAGCACGACCGGAGTTGATGAACGATGTGAAATCCAATTGGAATACATTACACGAGCTTCTTCTTAGTTATCTTGCTCTTAACCCAAAAAGCACACACAAATTCATTCTCGGTGCTTTTTCTGATCTTATTGTTACTCTAATGTCATTATCTTCTTCTTCTTGTTCTTATCCACCACCGCCGCAGAATTCTAACTGTGGTGGCTGTGGCGGTGGATGCTAA | 729 | 0.4348 | MQTSTMKTERRKNKRFNYLCFSTFIHPFTPPSSSLLQNQQQIDHNRPSLSTASATSSSSFMIKNFNTLYQNHNQITEPDSEPQPEPQLADFATAFASNRFFFSSPGRSNSIVESSSSSSSSSSLTATVPPPVNDSDNYKNKAIFNGSVAVPTYSPDPYMDFRRSMQEMVEARPELMNDVKSNWNTLHELLLSYLALNPKSTHKFILGAFSDLIVTLMSLSSSSCSYPPPPQNSNCGGCGGGC | 242 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre13g03814 | 242 | MobiDBLite | consensus disorder prediction | 32 | 53 | - | - | |
Trre13g03814 | 242 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 148 | 217 | IPR006458 | - | |
Trre13g03814 | 242 | ProSiteProfiles | OVATE domain profile. | 150 | 215 | IPR006458 | - | |
Trre13g03814 | 242 | Pfam | Transcriptional repressor, ovate | 154 | 216 | IPR006458 | - | |
Trre13g03814 | 242 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 39 | 216 | IPR038933 | GO:0045892 | |
Trre13g03814 | 242 | MobiDBLite | consensus disorder prediction | 112 | 137 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre13g03814 | Trre-Chr13 | 46281820 | 46282548 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Trre13g03814 | Ovate | 4.1e-23 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre13g03814 | - | - | lja:Lj0g3v0324199.1 | 209.92 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Trre13g03814 | 13 | 46281820 | 46282548 | Trre13g03814 | 13 | 46281820 | 46282548 | ECH | |
Trre13g03814 | 13 | 46281820 | 46282548 | Trre1g03019 | 1 | 25917631 | 25918344 | PCT |