Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03711 ATGACTGGAACTAATGAAGTCAACCTTAGTGAATCTAGGAGTGTTGTTCCATTGAATACTTATGTGTTAATCTCAAATTTCAAGCTTGCCTACAATCTTCTAAGACGTGCAGATGGAACATTCAACAGAGATTTAGCAGAGTTTCTTGACAGAAAGGTACCCGCAAACGCGGTTCCTGTCGATGGTGTCTTTTCGTTCGATCATGTCGATCGAAACTCCGGTCTTTTCAATCGAGTTTACTTACCGTCTTCAGAAAATGAACCACAATGGGGTGTCAGAGATTTAGAGAAACCATTGAGTACAACAGAAATTGTTCCTGTCATAGTATTCTTCCATGGTGGAAGCTTCTCACATTCTTCAGCTAACAGTGCTATCTATGACACATTTTGTAGAAGACTAGTAAGTATTTGTAAAGCTGCTGTTGTTTCGGTTAATTACCGAAGATCGCCGGAGCATCGGTTTCCATGTGCTTATGAAGATGGTTGGAATGCACTCAAATGGGTTAAGTCAAGAAAATGGCTTCAAAGTGGTAAGGAAAAAAAAGTTTATATTTACATGGCTGGTGATAGTTCTGGTGGAAACATTGTTCATCATGTGGCAGTAAAAGCTTCTGAAGAAAAAGAAGAAGGAATTGAGGTATTAGGGAACATTCTTCTTCATCCACTGTTTGGTGGTGAGAAAAGAACAGATTCTGAAATGAGATTAGATGGAAAGTACTTTGTTAGATTACAAGATCGTGATTGGTATTGGAGAGCTTTTTTACCAGAAGGTGAAGATAGAGACCATCCTGCTTGTAATCCGTTTGGTCCTAAAGGGGAAAAAAATCTTAAAGGACTTGATAAGTTTCCTAAAAGTCTTGTTTGTGTTGCTGGTTTGGATCTTCTACAAGATTGGCAATTAGCTTATGTTGATGGTTTGAGGAATTTTGGTCAACAAGTTAAACTACTTTTCCTTAAGGAGGCTACTATTGGGTTTTACTTTTTGCCTAATAATGATCATTTCTATTGCCTTATGGAGGAAATCAAGAACTTTGTTAATCCTAACTGTTAA 1050 0.3771 MTGTNEVNLSESRSVVPLNTYVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPANAVPVDGVFSFDHVDRNSGLFNRVYLPSSENEPQWGVRDLEKPLSTTEIVPVIVFFHGGSFSHSSANSAIYDTFCRRLVSICKAAVVSVNYRRSPEHRFPCAYEDGWNALKWVKSRKWLQSGKEKKVYIYMAGDSSGGNIVHHVAVKASEEKEEGIEVLGNILLHPLFGGEKRTDSEMRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGEKNLKGLDKFPKSLVCVAGLDLLQDWQLAYVDGLRNFGQQVKLLFLKEATIGFYFLPNNDHFYCLMEEIKNFVNPNC 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03711 349 Pfam alpha/beta hydrolase fold 108 326 IPR013094 GO:0016787
Trre13g03711 349 SUPERFAMILY alpha/beta-Hydrolases 58 346 IPR029058 -
Trre13g03711 349 FunFam Gibberellin receptor GID1 1 347 - -
Trre13g03711 349 PANTHER ARYLACETAMIDE DEACETYLASE 43 319 - -
Trre13g03711 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Trre13g03711 349 Gene3D alpha/beta hydrolase 1 346 IPR029058 -
Trre13g03711 349 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03711 Trre-Chr13 44925166 44926627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03711 1 346 Carbohydrate Esterase AT3G63010 73.199 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03711 K14493 - gmx:100788435 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03711 13 44925166 44926627 Trre13g03711 13 44925166 44926627 ECH
Trre13g03711 13 44925166 44926627 Trre1g04635 1 52429665 52431387 ECH
Trre13g03711 13 44925166 44926627 Trre1g04635 1 52429665 52431387 PCT