Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03665 ATGAGGATCCGTAAAAGACAGGCTATTTTCTCTTCTTCTGAATCTATTTCATCTTTGCATCTCTCAGATCCCCACCAGTTTAACCGGTCACCGGTCATGGTGCAACTCGGTGAAGAACAACCTACTCATGTTTCAGCTGGTTCTAACTTAGATCGTTATCAACCGTCTGATCAAACACTCCCACTGATTGGGAAACTAAACAACGGTCACGATTATCTCTCCGACATCGAGGAAAGTGGGGTACACAAACACCACAACAAGCAAGAACAAGAACAAGATCCTTTGGATGATGATAAAGTTAGAGAACAAGGCAAAGAGAGTGGAGACTTTGGAGATAACAAAAGTAATCATATCAGCAAAGGAGACATCTTGGTTGTTCCTCAAGTCTTGCCATCATCATCAAGTACTTTTGCTCAAGATGGGAGATGGTGTGAGGGAGAGAAAGCTATTCCTTTGAAGAAAAGGAAAGGAAGGTTAGAGAATGTTGGGATGGAGACTAATGATGGTACTAGTAAGAAAATGAAGACTAAGATGAAGACGAAGATGAATAAGAATTGTTCTATGGGAAAAGATGACGAAGATGAAGAAAGCGAAACGAAAGTGAATATTAAGAAGCGGGCGACAAAAAGGGGAAGTGCATTGATGGAAGGTTCGAGGTGCAGTCGTGTTAACGGAAGAGGATGGAGATGTTGTCAACAAACACTAGTTGGTTATTCACTTTGTGAGCATCATTTAGGGAAAGGAAGGTTGAGAAGTATGAGTAGTGTTAGAAGTAGATCTAATATTGGATTTTCTACTAATGTTGCACCAAATAATGTTGTTGATCATAGTGTTTCTAATTGTGATCTTGAAAAGAAAATCATGTTTGGAAATGATGTTGTTGATGATGATCATTTGGACAATGATGATGAGAAGAAACCGGTTGTGATGATTGCAAAGAAGAGAATGAAGCTTGGAATGGTTAAAGCTCGATCCATGAGCAGCTTATTGGGACAGACAGACAACAAAGTTGCTTCAGTTGATGAGAACAATAACAAGTAA 1041 0.3948 MRIRKRQAIFSSSESISSLHLSDPHQFNRSPVMVQLGEEQPTHVSAGSNLDRYQPSDQTLPLIGKLNNGHDYLSDIEESGVHKHHNKQEQEQDPLDDDKVREQGKESGDFGDNKSNHISKGDILVVPQVLPSSSSTFAQDGRWCEGEKAIPLKKRKGRLENVGMETNDGTSKKMKTKMKTKMNKNCSMGKDDEDEESETKVNIKKRATKRGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMSSVRSRSNIGFSTNVAPNNVVDHSVSNCDLEKKIMFGNDVVDDDHLDNDDEKKPVVMIAKKRMKLGMVKARSMSSLLGQTDNKVASVDENNNK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03665 346 MobiDBLite consensus disorder prediction 40 63 - -
Trre13g03665 346 Pfam WRC 216 256 IPR014977 -
Trre13g03665 346 MobiDBLite consensus disorder prediction 8 25 - -
Trre13g03665 346 MobiDBLite consensus disorder prediction 80 119 - -
Trre13g03665 346 ProSiteProfiles WRC domain profile. 214 258 IPR014977 -
Trre13g03665 346 MobiDBLite consensus disorder prediction 184 200 - -
Trre13g03665 346 MobiDBLite consensus disorder prediction 40 66 - -
Trre13g03665 346 PANTHER EXPRESSED PROTEIN-RELATED 129 330 - -
Trre13g03665 346 MobiDBLite consensus disorder prediction 163 200 - -
Trre13g03665 346 MobiDBLite consensus disorder prediction 1 25 - -
Trre13g03665 346 MobiDBLite consensus disorder prediction 80 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03665 Trre-Chr13 44212797 44214648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03665 207 262 GRF Transcription Factor Family AT2G36400 36.207 8.30e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03665 - - tpra:123892600 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03665 13 44212797 44214648 Trre13g03665 13 44212797 44214648 ECH
Trre13g03665 13 44212797 44214648 Trre1g02177 1 17347424 17349399 PCT