Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03657 ATGGCTGCGGTTCAGGCAAATGGTGTTACGGAGGATCGCAGCCAGCTTGATGTTGGCAATAAAGCACTCTTTGTTGGAATTTATCATGGCCAAAATGGTCCTGAGGCTTCCAACTTCTTGAGTACTAATCTCTGTGAGGATCTAATCAGGCGTATTCAGCAGAATAATAATAATAATATGTCTGAAAATATTCTGAGGCAAGTTGTTGCTGAAATGGAGGAATCGTTTATGACTGATGTTGAAGAGACAGAACCTGCGACATCTTCAAGAGTCTTATATGACCATAATAAATTCATTATATTTGGATCTGGTGGACTTTGGAAATTGTTGACAAAACGGAAAGCAGCTGAAATTGTTCACACCAATCCACGAGATGGAATCGCGAAAAGGCTTTTGACGACTGCTCTAGAGATTGCAGCTAGAAGAAATAATATAACCTATAGTGAGCTTCGGCAGATTCCTGCGGGACATGGTGTTATTAGGGGTCCTAGTGTTTCTGTTGAAGGGACTAGGCGGGCTTATCATGATGATATCTCTGTGATTGTTGTATTCTTCGACAAAAAACCGGAACTGAATCCGACTGTGATGCCAGTGGTGACCTCGGTGCCAGCAATTGGTTCCTTCAGAAACTTCTCTGACGCGATTCATCCCTCACCTTTTAGATATCTCGATGTTGTCTTCAAGAAGTCAAAACCCAAGATCATGCTTCCTCTGGCTTGGTCTAGGCCACTGATTAGGCATCACTATGGCGAATTCTCCATGGCTGCAGTTCAGGCGAATATGGATATGGAAGATCAGAGCCAAGTTGAAGTTGGCACCGATGCACTCTTTGTTGGAGTTTATGATGGCCATAAAGGCGACACCGCTGCCATCTATCTTAGAAATCATTTCTTCAGGGAACTATTGAGTCGTATTCAGCAGAATAATAACTTAATGACTGAGCTTATTCTGAGGCAAGTTGTTCACCAAATGGAGAGAGATTTTATTGAGTTTGCTAGAAATAGTTTTGAGCAACAGCATGAGGTGACAGAACTGGAGTCGTCAGGCGGCAATGTTTGA 1059 0.4268 MAAVQANGVTEDRSQLDVGNKALFVGIYHGQNGPEASNFLSTNLCEDLIRRIQQNNNNNMSENILRQVVAEMEESFMTDVEETEPATSSRVLYDHNKFIIFGSGGLWKLLTKRKAAEIVHTNPRDGIAKRLLTTALEIAARRNNITYSELRQIPAGHGVIRGPSVSVEGTRRAYHDDISVIVVFFDKKPELNPTVMPVVTSVPAIGSFRNFSDAIHPSPFRYLDVVFKKSKPKIMLPLAWSRPLIRHHYGEFSMAAVQANMDMEDQSQVEVGTDALFVGVYDGHKGDTAAIYLRNHFFRELLSRIQQNNNLMTELILRQVVHQMERDFIEFARNSFEQQHEVTELESSGGNV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03657 352 Gene3D - 3 86 IPR036457 -
Trre13g03657 352 SUPERFAMILY PP2C-like 239 334 IPR036457 -
Trre13g03657 352 SUPERFAMILY PP2C-like 11 187 IPR036457 -
Trre13g03657 352 Pfam Protein phosphatase 2C 84 142 IPR001932 -
Trre13g03657 352 Gene3D - 242 350 IPR036457 -
Trre13g03657 352 Gene3D - 87 190 IPR036457 -
Trre13g03657 352 PANTHER PROTEIN PHOSPHATASE 235 326 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03657 Trre-Chr13 44162050 44167178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03657 1 83 PP2C-type Phosphatase Gene Family AT5G06750 44.578 6.88e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03657 K01102 - tpra:123898969 227.254