Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03643 ATGTATCAACATTGGTCAAGGATGTATGGAACACAATGGGAATCTTACATGGGAATTAACAACCTAGTTAAGGTTGTTGAATCAGAACAAGTCATGAGTTTTGAGCCAATTAAATCAACCTGCAATAACATTGTGACTAGTAGTAGTAATCTTGAAACACCTTATGAAGGTTTTGGTGCAGTAACTATAGCTAAAATCAAAAGTTCTGTTGGTTTTCAAGGTGGAGAATATTATGATGAGGATCAGATTGAAGTTCCAGATTGGTGTTTTGATCAGTTTCCAAAGATAACAGATCCTCCATTGCTGAATTGTCAAGGTTCTGGTGATAACTTCACAAGCTCTTTGTACTCAGTTTCTAAAGAATCTTTGTTGTCTAATAGTGCAGATAGTCATAATTCTTCTGAAGAAGAATATAGTAATTTTCAGTCCGGAAATATGTCATTTTATAATCATTTTCCTCAAAATCATGATGAATTGATGAAGAATGATGCTTCCATAGATGAAAAGCCCTTTGAAATTTCATTTCAAAGAAGTAAGTCGGGCTCACCTACAAAGTCACACAAGCAGTCTCCACAACTTTATGGAATTGGGTGTGCAACTTCTAGCAATAATGCTTCTAGAAAAGCTCTAACATGTAAAAGAAGGATAAGATGGACCGAGGAACTTCATGAATCGTTCATGATGATCGTTGATCACCTCGGTGGTCCAGACAAAGCAAAGCCTAAGGCTATACTAGATATGATGAAATCGAATTCGCTATCACTTTCTCATGTTAAAAGTCATTTACAGAAATGTAGATCTTCAGAACGCGTGCATAAAGCTTTGCGAGAAAGATCTGAGGAAGGACATAGAACAGATAGAGTCACCGAGCTTCAACTCAAAATCAGCCATATGCAAATTGAGGAATCGCGACAATTGCAACTAGAGGTTCGAAAGAGTATTTCACAACAGCTAGAGATGCAAAGAAGTTTGGAAACACTCATTGAAGAACATAGCGAGAAGCTCAAAGTAATTCAAAAAGAAAAAACCAACCAAAGAAAATCTTGGACACAACGAGAAATGACGGTTCCGAAATAA 1077 0.3658 MYQHWSRMYGTQWESYMGINNLVKVVESEQVMSFEPIKSTCNNIVTSSSNLETPYEGFGAVTIAKIKSSVGFQGGEYYDEDQIEVPDWCFDQFPKITDPPLLNCQGSGDNFTSSLYSVSKESLLSNSADSHNSSEEEYSNFQSGNMSFYNHFPQNHDELMKNDASIDEKPFEISFQRSKSGSPTKSHKQSPQLYGIGCATSSNNASRKALTCKRRIRWTEELHESFMMIVDHLGGPDKAKPKAILDMMKSNSLSLSHVKSHLQKCRSSERVHKALRERSEEGHRTDRVTELQLKISHMQIEESRQLQLEVRKSISQQLEMQRSLETLIEEHSEKLKVIQKEKTNQRKSWTQREMTVPK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03643 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 204 342 IPR044848 GO:0003700
Trre13g03643 358 NCBIfam myb-like DNA-binding domain, SHAQKYF class 213 267 IPR006447 GO:0003677
Trre13g03643 358 SUPERFAMILY Homeodomain-like 212 267 IPR009057 -
Trre13g03643 358 Coils Coil 321 348 - -
Trre13g03643 358 Gene3D - 212 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03643 Trre-Chr13 44048219 44050255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03643 209 354 G2-like Transcription Factor Family AT3G04450 38.710 2.14e-24 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre13g03643 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03643 - - tpra:123891582 624.394