Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03641 ATGGTTATAAACACTTACACTACAATTTCTAGCTTGCTGGAGGGTGTTGGTGTCCTTGGGATTCAACACGTTGCATCATGCCTTCAACAACAATGTGAAAGAACTGTTGGATGCAATCTCTCTCTGTCATACTCAAAGGAACTATGTTATCAGTCAATTTTTCCACAAGGAACCATTGGAAATCCATGTGGTGGAAACTCTACAATGATTAAGCTTGTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTTCTGTCATATCAAGCAATTCCTTGGCTGTCAAGATTTTTTATCCCATATTTTGGGGTTTGATGACTCTCAGCACTTTTGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTCGCTGGACTACTATTTTTCACTCTGTTGATTGGTAACTTATCAATAGCAACAATGTTCCATCACATAACACGATCTAATGATATCTTTTGGATGGCTCTTATTGCAAACGCATGGTTGAACAATGACGAAGTCAGAAAAGCAATTCACACTGTAGAGAAAAGTGTAGCCAGTAGTTGGGATTTATGCACAAACAAAATTTCCTTCGATCATAACTTCCAGAGGATATTGAGCTCTTATATTCAGATTGCTGAGTTTGAGGAAATTCCTGAAGAGAAGAGACAAAAGCTGAGTGATGGTGATTTTGGTGAAAGTGCAGTCTGCAAGGAGCTATTCCTAATTGGAGTTTAA 759 0.386 MVINTYTTISSLLEGVGVLGIQHVASCLQQQCERTVGCNLSLSYSKELCYQSIFPQGTIGNPCGGNSTMIKLVCLDVEGPFKYGIYQWALSVISSNSLAVKIFYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLAGLLFFTLLIGNLSIATMFHHITRSNDIFWMALIANAWLNNDEVRKAIHTVEKSVASSWDLCTNKISFDHNFQRILSSYIQIAEFEEIPEEKRQKLSDGDFGESAVCKELFLIGV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03641 252 Gene3D - 170 204 - -
Trre13g03641 252 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 19 175 - -
Trre13g03641 252 SUPERFAMILY Voltage-gated potassium channels 16 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03641 Trre-Chr13 43974365 43975817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03641 18 152 Ion Channels AT5G15410 69.565 3.79e-52 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03641 K05391 - gmx:100798823 225.713