Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03632 ATGGTTAAATCACACATTGATCACATCATCATGGTGAAACGCGAATTGAATATTCCTATTCACAACGACGCTTCTGATAACTCCGACGACGTTGATTATGAATCTGTTCACGCCCGTCGAAATCTCCGTTCTCGCTATCTCGCAGTTAAGAACATGATTAACGGCGATGAAAGGGAGAATATTGCAAAGACTGACTCTGAAGCATTCGGTTCGATCATCGGTGAAATTGAGAACTTACACCAGTCAGTCACAACAACGAGAGAACAAGTAGCTGATGCGCAGGCTCTTTTGGACATAACCAAATCCTTGGGTGTGTCTGTGAAAGCTCATTCTAGTGGTGGACTCACTCCTTCAGCCTTTGTCACTCACATTCTTGAAAAATTCGGACAACGAGATGGAACAAGTACCAGCAGAAAAAAAATCAGCAGAAACTCGATAGCTTGGAACGACATTGGAGTTGCAGTTTCAAGTGTTTTTGGAAAGGCATATGGCTGTTCTACAGTGATTGGTCCAATGGATGCTAAATTAAAGCCGAGGAGGGTTTATCGAAAAAGGAGTGTGAAGCCCACTAAATTGGCACGGCCAGAAGAGCTTAATGAAGGTTCAAGGAATGAGAGAAATGACACTGATAAAAATATGTTAACTATGTTTAACATCTTAAGGAATAATAGACTTGTCAAGCTTGAAAATTTGGTTTTGAATAGGAACTCTTTTGCACAAACGGTGGAGAACTTATTTACGTTATCTTTTTTAGTCAAAGATGGGCGGGCTGAAATAAAAGTGGACAAGGCTGGATGTCACCTAGTTTCGCCTAGGAATGCTCCTGCTGCAAAATCAGTTGCTTCTAAGGATGTTGCTTTGAGTCACTTTGTATTCCGACTTGACTATAATGATTGGAAGATGATGGTTCGCTCTATTGTTGGAGAGGAGTTGATGCCTCATAGGAATAATCAATCACAGATTTAG 966 0.4099 MVKSHIDHIIMVKRELNIPIHNDASDNSDDVDYESVHARRNLRSRYLAVKNMINGDERENIAKTDSEAFGSIIGEIENLHQSVTTTREQVADAQALLDITKSLGVSVKAHSSGGLTPSAFVTHILEKFGQRDGTSTSRKKISRNSIAWNDIGVAVSSVFGKAYGCSTVIGPMDAKLKPRRVYRKRSVKPTKLARPEELNEGSRNERNDTDKNMLTMFNILRNNRLVKLENLVLNRNSFAQTVENLFTLSFLVKDGRAEIKVDKAGCHLVSPRNAPAAKSVASKDVALSHFVFRLDYNDWKMMVRSIVGEELMPHRNNQSQI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03632 321 PANTHER UNCHARACTERIZED 22 319 IPR027786 GO:0005634|GO:0006281|GO:0030915
Trre13g03632 321 MobiDBLite consensus disorder prediction 189 208 - -
Trre13g03632 321 Pfam Nse4 C-terminal 226 305 IPR014854 -
Trre13g03632 321 MobiDBLite consensus disorder prediction 185 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03632 Trre-Chr13 43906865 43910608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03632 36 316 Non-SMC Element family AT1G51130 51.408 8.40e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03632 K22825 - gmx:100781485 379.793