Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03607 ATGGCTGCGGTTCAGGCGAATATGGATATAGAAGATCATAGCCAGGTTGAAGTTGGCACTGATGCACTCTTTGTTGGAGTTTATGATGGCCACAAAGGCGACACCGCTGCTATCTATCTTAGAGATCATATCTTCGGGGAAATATTGAGGCGTATTCAGCAGAATAATAACTTAATGACGGAGCTTATTCTGAAGCAAGTTGTTCACCAAATGGAGAGAGTTCTTCCGGAGCTTCTTAGCAATTTGAAGTGCAGATGTCCCTCTCTAGACATGACCGACTGCATTGTTGAACTAAACATGATCAAGGGATGCCAAAGCTGA 321 0.4361 MAAVQANMDIEDHSQVEVGTDALFVGVYDGHKGDTAAIYLRDHIFGEILRRIQQNNNLMTELILKQVVHQMERVLPELLSNLKCRCPSLDMTDCIVELNMIKGCQS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03607 106 SUPERFAMILY PP2C-like 8 77 IPR036457 -
Trre13g03607 106 Gene3D - 1 97 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03607 Trre-Chr13 43669789 43671943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03607 1 72 PP2C-type Phosphatase Gene Family AT5G06750 45.833 1.42e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03607 K01102 - tpra:123896634 82.0333