Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03502 ATGGCGCGGAATAAGAAAGCTAGGGTTTCTGATGATGAAGAAATCGAAGATCAACCTCAAAAGACTCTCTACCAGGTTCTTGGTTTGGAGAAAACTGCTTCACAACAGGAAATAAAGAAGGCTTATTACAAATTGGCATTGCGGCTTCATCCGGATAAGAACCCGGGTGATGAGGAGGCTAAAGAGAAATTCCAACAATTGCAAAAAGTTATTTCCATTCTTGGAGACGAAGAGAAACGAGCCATCTATGATGAGACTGGTTGTATTGATGATGATGATCTTGCAGGAGATGTTCAGAATCTTCACAAGTTTTTCAGAACTATGTACAAGAAGGTCACTGAAGCTGAAATTGAAGAATTTGAAGCAAACTACAGGGGATCTGATTCAGAGAAAAATGATTTGATTGAGCTGTACAAGAAGTACAAGGGGAATATGAACAGGCTTTTTTGTTCAATGCTTTGTTCAGATGCTAAACTTGACTCACACCGATTCAAAGATATTCTTGATGAGGCTATAGCTGCTGAAATCAAACCGCCCACAAGTCCTTTAAGGAGGAGGGCAAAGTCAAATAAGCAGCCTGAAACAGATCTATATGCAGTCATAGCACAACGCAGAAACGAGAGGAAAGGCCAGTTTGATTCAATGTTCTCATCTTTAGTATCAAAGTATGGTGGAGGTGATTTACCAGAACCTTCTGAAGAGGAATTTGAAGCTGCACAGAAAAAGTTGGAGAAGGGAAGATCTTCAAAAAAATCAAAGCAATCAAAAGGAAAGTAA 777 0.3951 MARNKKARVSDDEEIEDQPQKTLYQVLGLEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRAIYDETGCIDDDDLAGDVQNLHKFFRTMYKKVTEAEIEEFEANYRGSDSEKNDLIELYKKYKGNMNRLFCSMLCSDAKLDSHRFKDILDEAIAAEIKPPTSPLRRRAKSNKQPETDLYAVIAQRRNERKGQFDSMFSSLVSKYGGGDLPEPSEEEFEAAQKKLEKGRSSKKSKQSKGK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03502 258 CDD DnaJ 22 76 IPR001623 -
Trre13g03502 258 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
Trre13g03502 258 SMART dnaj_3 21 79 IPR001623 -
Trre13g03502 258 SUPERFAMILY Chaperone J-domain 21 91 IPR036869 -
Trre13g03502 258 Gene3D DnaJ domain 6 103 IPR036869 -
Trre13g03502 258 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 13 254 IPR042977 -
Trre13g03502 258 MobiDBLite consensus disorder prediction 223 258 - -
Trre13g03502 258 PRINTS DnaJ domain signature 79 98 IPR001623 -
Trre13g03502 258 PRINTS DnaJ domain signature 59 79 IPR001623 -
Trre13g03502 258 PRINTS DnaJ domain signature 24 42 IPR001623 -
Trre13g03502 258 PRINTS DnaJ domain signature 42 57 IPR001623 -
Trre13g03502 258 Pfam DnaJ domain 23 84 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03502 Trre-Chr13 42691851 42694100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03502 24 84 C2H2 Transcription Factor Family AT1G74250 40.909 3.26e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g03502 13 42691851 42694100 Trre13g03502 13 42691851 42694100 ECH
Trre13g03502 13 42691851 42694100 Trre1g02091 1 16679409 16683170 PCT