Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03381 ATGGGTTATGAAAGTGAGTTCTACCTTAACCTCCCAGAAGTTCAAAAGGCTCTCCATGCCAATCGTACCAATCTTCCGTATGCATGGTCTACCTGTAGTAATATTTTGAATTACAATGAAACTAATCTCAAGATTAATATTCTTCCAATTCTTAAACGAATAGTTCAAAACCATATTCCAATTTTGGTTTACAGTGGAGACCAAGATTTGGTTATACCATTACTAGGTTCTCGAACACTCATTCGTGAACTAGCTCATGACCTTAAATTCAAGATTACTGACCCATATAGAGTTTGGTTCCACAAAGACCAGGTTGGAGGTTGA 324 0.3704 MGYESEFYLNLPEVQKALHANRTNLPYAWSTCSNILNYNETNLKINILPILKRIVQNHIPILVYSGDQDLVIPLLGSRTLIRELAHDLKFKITDPYRVWFHKDQVGG 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03381 107 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 100 IPR001563 GO:0004185|GO:0006508
Trre13g03381 107 Gene3D - 1 36 - -
Trre13g03381 107 Pfam Serine carboxypeptidase 5 106 IPR001563 GO:0004185|GO:0006508
Trre13g03381 107 SUPERFAMILY alpha/beta-Hydrolases 5 107 IPR029058 -
Trre13g03381 107 Gene3D - 47 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03381 Trre-Chr13 41332063 41332940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03381 5 107 Calmodulin-binding Proteins AT2G22960 26.214 8.81e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03381 K16297 - csav:115705718 179.104