Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03346 ATGGAGAATTATTCAAGAAGTGGTGTTCATGATTTCACTATGGCTTCAAGAAAAGCTGAAGAAGCAAATTGGAGACGTTATGAGGCAACACAATGGCTTGAAAGTCAAGTGGGTCCTATTGGAATATCAAAACAACCAACAGAAAGAGAACTTGTTTCTTGCTTGAGAAATGGTCTCATTCTTTGTAAGGCTATTAACAAGATTCATCCAGGAGCAGTGCCAAAGGTTGTGGATACTCAAGTGCCATTGCAATCACTTACATGGGATTCTCAGCCTTTACCTGCTTATCAGTATTTTGAAAATGTCAGAAACTTTCTGGTTGCTGCTGCAGAATTAAAGCTTCCAGCTTTCGAAGCTTCTGATCTCGAAAGGGAAAGTGTAGAAAATGGATCAGCAGGAAAAATTGTTGATTGTATTCTGTCACTTAAATGGTTTCATGAGTCGAAGCAGATGAACAATCAGAGTGGAAGCAAACACATGAAATCTCCTTTAGTTATGCAATCAATCAGTAGATTGCAACAAAGGGCCACAACTGCATTACCCACTGATGCATGCAGGCGCTTGGATTTGTCTGCAACATCCGAAAAAAAGCCTCCTGCTGAGAATAATTTTCAAAAACCAGAAGCAGAAATTATGGAATCACTTGTCAAGATACTAGTTGACCGTATGCTTGATGCCAAAGAAAATGTCGATGGAAAACTTGTTGCTTCTCTTTCTAATGGAGACACGGATCCAATAATCCTATTTAATCAGATTTTGACTAGTTATTGTGGGGAACAGCCATCTTTGAATTTACCTGAGTTGCCATTGCTACTAAAGAATTTTATAAAAGAAGGGAGTAGCTTACCTCCTCACCTCACTTCCAAACCCACGGAATCAGATGCTTTATCTGCACGTGCAAGTTCCAAGTGTTACAGAGCCTGCCCTGGAAAGTGCACATGCAATCACAAGCATCTCATAGACATACAGAAAAAAGAACTTCGGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAATGAGTTTGAAGAGATGCAATCTCAGTTTCAGAAATTTTTCAATGATATAGGTAGTCAAGTAAATGAGATGTCAACCAAAGCTCTTGGATATCATAAAGTAGTAGAAGAGAACAGAAAACTGTACAACATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCCGCGTTCAGGGCTGAATCCAAGAATGTGGTCGATTTCATCGGGGAAGACGGTTCTCTATTCATTTTAGACCCATCAAAAACGCTAAAAGATGGAAGAAAACTTTTTCAGTTTAATCGGATTTTTGGTCCAACAGCTGGCCAAGACGAGGTTTATCGAGACACCCAACCTTTAATTAGATCTGTGATGGATGGATACAACGTTTGTATTTTTGCTTATGGTCAAACGGGGTCTGGGAAGACTCACACCATGAGTGGTCCTTCCGGCGGAACATCCAAGGATATGGGGATCAATTATCTGGCTCTCAATGATTTGTTTCAAATGTCTAATGAAAGGAAGGACAATATAACATTGCGGTCAGTAAAGTCTACCACTGATGTTCTAACCCTCATGAAGCTTGGCGAGGTTAACCGCGCCGTCAGTTCTACAGCAATAAACAATAGGAGTAGTCGTTCGCACAGTGTACTTACTGTGCATATCAATGGAAAAGATACATCTGGCAACTCCATTCGAAGCTGCCTTCATTTAGTAGACCTTGCCGGAAGCGAAAGAGTTGACAAGTCGGAAGTCACAGGAGATAGACTTAAGGAAGCGCTATATATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACAGCACTGGCACAGAAGAATTCTCACATTCCTTACAGGAACAGCAAACTTACACTTCTTTTGCAGGACTCATTAGGTGGACATGCTAAAACGTTGATGTTTGCACATGTGAGTCCTGAAGCAGATTCCTTTGGCGAAACAGTGAGTACTCTAAAATTTGCTCAGAGGGTTTCCACTGTGGAACTTGGCGCAGCCCGGATGAACAAAGAAAGCAGTGAAGTTATGCAACTTAAAGCACAGGTTGAGAACCTTAAGATTGCTTTGGCAAACAAAGAAAATTCAAGACCAATGTTAAATAGAACTAAAGAGCCTCTCACTCCGTTAGAAAAAACTCCACTGCGCCTGCGAAGACTTAGTATTGAGAATTGCAGCACGGTAAAGACCGACAAACCTGTGAAAGCTGAGGATAAAAGTGGAGCCAAATCACCTTCTTACATTCCTCGTTCAAGAAGGCTAAGCTTGGAAGGTCCAAGAACTATCAAAAAAGCATCAGCTGATGTAAACAAAACCTTACAGTTTGAGCCAATGTCTCAACAGAAATATCGTCCACAGCAAGATCCAGAAGCAATGTCAAAGCTAAATGGTCAACTGAGCAATGGCAATTCCAGGTCAGATTTGCATGTTAAACCTCCTTCGAGTCCTACAAACATGTATCAGAAGAGGTTGATAAAAGTTGATAGTGGAGTCCAAATTCACCCTCTTAAACTACCTCAAACACCTGAACCACAATTGCTAGATAAAAATGATTCAAACAGAATTGTGGCAAGTGATCTTAATGATTCCATAACAACAAAGGTGATAGTGAGCACAAATGGAAAAGGTTCCCAACTAAGAAGATCCCTTAGAACAATCGGGAAACTGATTAATGGCCCTGATAAGAAGAGCCAACAGATTAATGTTGAAGTGAAGTCACCTATCAAGAGCACCAGTCATGCAAATCAGATAAAGTCGCCTATAGCAACTACTGAAAGGACAACAAGGAGACGATCTTTAACAGGAATTCAACCATCCGGACCTAACAATTCACGAAGATCTTCTCTTGGAGGAGTGAAACCAGTCCCAGTAGCATATGAGAAGGAGAGAAATGCTAGAACACCTCCTCCTGTTCATTCAGAAAGCAAGAGTTCAAAACGGTGGCTATAG 2970 0.4074 MENYSRSGVHDFTMASRKAEEANWRRYEATQWLESQVGPIGISKQPTERELVSCLRNGLILCKAINKIHPGAVPKVVDTQVPLQSLTWDSQPLPAYQYFENVRNFLVAAAELKLPAFEASDLERESVENGSAGKIVDCILSLKWFHESKQMNNQSGSKHMKSPLVMQSISRLQQRATTALPTDACRRLDLSATSEKKPPAENNFQKPEAEIMESLVKILVDRMLDAKENVDGKLVASLSNGDTDPIILFNQILTSYCGEQPSLNLPELPLLLKNFIKEGSSLPPHLTSKPTESDALSARASSKCYRACPGKCTCNHKHLIDIQKKELRDLKALKLKIKNEFEEMQSQFQKFFNDIGSQVNEMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPAFRAESKNVVDFIGEDGSLFILDPSKTLKDGRKLFQFNRIFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTSKDMGINYLALNDLFQMSNERKDNITLRSVKSTTDVLTLMKLGEVNRAVSSTAINNRSSRSHSVLTVHINGKDTSGNSIRSCLHLVDLAGSERVDKSEVTGDRLKEALYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARMNKESSEVMQLKAQVENLKIALANKENSRPMLNRTKEPLTPLEKTPLRLRRLSIENCSTVKTDKPVKAEDKSGAKSPSYIPRSRRLSLEGPRTIKKASADVNKTLQFEPMSQQKYRPQQDPEAMSKLNGQLSNGNSRSDLHVKPPSSPTNMYQKRLIKVDSGVQIHPLKLPQTPEPQLLDKNDSNRIVASDLNDSITTKVIVSTNGKGSQLRRSLRTIGKLINGPDKKSQQINVEVKSPIKSTSHANQIKSPIATTERTTRRRSLTGIQPSGPNNSRRSSLGGVKPVPVAYEKERNARTPPPVHSESKSSKRWL 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03346 989 CDD CH_AtKIN14-like 25 143 - -
Trre13g03346 989 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 514 IPR027640 GO:0003777|GO:0007018
Trre13g03346 989 Gene3D Kinesin motor domain 331 513 IPR036961 -
Trre13g03346 989 SMART ch_5 25 142 IPR001715 GO:0005515
Trre13g03346 989 Pfam Calponin homology (CH) domain 25 146 IPR001715 GO:0005515
Trre13g03346 989 Pfam Kinesin motor domain 512 668 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g03346 989 Coils Coil 676 703 - -
Trre13g03346 989 Gene3D - 10 176 IPR036872 -
Trre13g03346 989 ProSiteProfiles Kinesin motor domain profile. 389 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g03346 989 SMART kinesin_4 387 677 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g03346 989 FunFam Kinesin-like protein KIN-14L 11 173 - -
Trre13g03346 989 Pfam Microtubule binding 375 511 IPR031852 GO:0008017
Trre13g03346 989 SUPERFAMILY Calponin-homology domain, CH-domain 25 156 IPR036872 -
Trre13g03346 989 MobiDBLite consensus disorder prediction 914 956 - -
Trre13g03346 989 MobiDBLite consensus disorder prediction 914 989 - -
Trre13g03346 989 MobiDBLite consensus disorder prediction 779 824 - -
Trre13g03346 989 MobiDBLite consensus disorder prediction 733 824 - -
Trre13g03346 989 Gene3D Kinesin motor domain 514 710 IPR036961 -
Trre13g03346 989 PRINTS Kinesin heavy chain signature 619 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g03346 989 PRINTS Kinesin heavy chain signature 540 557 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g03346 989 PRINTS Kinesin heavy chain signature 570 588 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g03346 989 PRINTS Kinesin heavy chain signature 462 483 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre13g03346 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 348 668 IPR027417 -
Trre13g03346 989 Coils Coil 320 347 - -
Trre13g03346 989 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03346 Trre-Chr13 41006072 41012619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03346 325 669 Calmodulin-binding Proteins AT5G65930 39.186 4.63e-61 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03346 K10406 - gmx:100786642 1393.64