Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre13g03345 | ATGGAGAATTATTCAAGAAGTGGTGTTCATGATTTCACTATGGCTTCAAGAAAAGCTGAAGAAGCAAATTGGAGACGTTATGAGGCAACACAATGGCTTGAAAGTCAAGTGGGTCCTATTGGAATATCAAAACAACCAACAGAAAGAGAACTTGTTTCTTGCTTGAGAAATGGTCTCATTCTTTGTAAGGCTATTAACAAGATTCATCCAGGAGCAGTGCCAAAGGTTGTGGATACTCAAGTGCCATTGCAATCACTTACATGGGATTCTCAGCCTTTACCTGCTTATCAGTATTTTGAAAATGTCAGAAACTTTCTGGTTGCTGCTGCAGAATTAAAGCTTCCAGCTTTCGAAGCTTCTGATCTCGAAAGGGAAAGTGTAGAAAATGGATCAGCAGGAAAAATTGTTGATTGTATTCTGTCACTTAAATGGTTTCATGAGTCGAAGCAGATGAACAATCAGAGTGGAAGCAAACACATGAAATCTCCTTTAGTTATGCAATCAATCAGTAGATTGCAACAAAGGGCCACAACTGCATTACCCACTGATGCATGCAGGCGCTTGGATTTGTCTGCAACATCCGAAAAAAAGCCTCCTGCTGAGAATAATTTTCAAAAACCAGAAGAAATTATGGAATCACTTGTCAAGATACTAGTTGACCGTATGCTTGATGCCAAAGAAAATGTCGATGGAAAACTTGTTGCTTCTCTTTCTAATGGAGACACGGATCCAATAATCCTATTTAATCAGATTTTGACTAGTTATTGTGGGGAACAGCCATCTTTGAATTTACCTGAGTTGCCATTGCTACTAAAGAATTTTATAAAAGAAGGGAGTAGCTTACCTCCTCACCTCACTTCCAAACCCACGGAATCAGATGCTTTATCTGCACGTGCAAGTTCCAAGTGTTACAGAGCCTGCCCTGGAAAGTGCACATGCAATCACAAGCATCTCATAGACATACAGAAAAAAGAACTTCGGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAATGAGTTTGAAGAGATGCAATCTCAGTTTCAGAAATTTTTCAATGATATAGGTAGTCAAGTAAATGAGATGTCAACCAAAGCTCTTGGATATCATAAAGTAGTAGAAGAGAACAGAAAACTGTACAACATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCCGCGTTCAGGGCTGAATCCAAGAATGTGGTCGATTTCATCGGGGAAGACGGTTCTCTATTCATTTTAGACCCATCAAAAACGCTAAAAGATGGAAGAAAACTTTTTCAGTTTAATCGGATTTTTGGTCCAACAGCTGGCCAAGACGAGGTTTATCGAGACACCCAACCTTTAATTAGATCTGTGATGGATGGATACAACGTTTGTATTTTTGCTTATGGTCAAACGGGGTCTGGGAAGACTCACACCATGAGTGGTCCTTCCGGCGGAACATCCAAGGATATGGGGATCAATTATCTGGCTCTCAATGATTTGTTTCAAATGTCTAATGAAAGGAAGGACAATATAACATTGCGGTCAGTAAAGTCTACCACTGATGTTCTAACCCTCATGAAGCTTGGCGAGGTTAACCGCGCCGTCAGTTCTACAGCAATAAACAATAGGAGTAGTCGTTCGCACAGTGTACTTACTGTGCATATCAATGGAAAAGATACATCTGGCAACTCCATTCGAAGCTGCCTTCATTTAGTAGACCTTGCCGGAAGCGAAAGAGTTGACAAGTCGGAAGTCACAGGAGATAGACTTAAGGAAGCGCTATATATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACAGCACTGGCACAGAAGAATTCTCACATTCCTTACAGGAACAGCAAACTTACACTTCTTTTGCAGGACTCATTAGGTGGACATGCTAAAACGTTGATGTTTGCACATGTGAGTCCTGAAGCAGATTCCTTTGGCGAAACAGTGAGTACTCTAAAATTTGCTCAGAGGGTTTCCACTGTGGAACTTGGCGCAGCCCGGATGAACAAAGAAAGCAGTGAAGTTATGCAACTTAAAGCACAGGTTGAGAACCTTAAGATTGCTTTGGCAAACAAAGAAAATTCAAGACCAATGTTAAATAGAACTAAAGAGCCTCTCACTCCGTTAGAAAAAACTCCACTGCGCCTGCGAAGACTTAGTATTGAGAATTGCAGCACGGTAAAGACCGACAAACCTGTGAAAGCTGAGGATAAAAGTGGAGCCAAATCACCTTCTTACATTCCTCGTTCAAGAAGGCTAAGCTTGGAAGGTCCAAGAACTATCAAAAAAGCATCAGCTGATGTAAACAAAACCTTACAGTTTGAGCCAATGTCTCAACAGAAATATCGTCCACAGCAAGATCCAGAAGCAATGTCAAAGCTAAATGGTCAACTGAGCAATGGCAATTCCAGGTCAGATTTGCATGTTAAACCTCCTTCGAGTCCTACAAACATGTATCAGAAGAGGTTGATAAAAGTTGATAGTGGAGTCCAAATTCACCCTCTTAAACTACCTCAAACACCTGAACCACAATTGCTAGATAAAAATGATTCAAACAGAATTGTGGCAAGTGATCTTAATGATTCCATAACAACAAAGGTGATAGTGAGCACAAATGGAAAAGGTTCCCAACTAAGAAGATCCCTTAGAACAATCGGGAAACTGATTAATGGCCCTGATAAGAAGAGCCAACAGATTAATGTTGAAGTGAAGTCACCTATCAAGAGCACCAGTCATGCAAATCAGATAAAGTCGCCTATAGCAACTACTGAAAGGACAACAAGGAGACGATCTTTAACAGGAATTCAACCATCCGGACCTAACAATTCACGAAGATCTTCTCTTGGAGGAGTGAAACCAGTCCCAGTAGCATATGAGAAGGAGAGAAATGCTAGAACACCTCCTCCTGTTCATTCAGAAAGCAAGAGTTCAAAACGGTGGCTATAG | 2967 | 0.4071 | MENYSRSGVHDFTMASRKAEEANWRRYEATQWLESQVGPIGISKQPTERELVSCLRNGLILCKAINKIHPGAVPKVVDTQVPLQSLTWDSQPLPAYQYFENVRNFLVAAAELKLPAFEASDLERESVENGSAGKIVDCILSLKWFHESKQMNNQSGSKHMKSPLVMQSISRLQQRATTALPTDACRRLDLSATSEKKPPAENNFQKPEEIMESLVKILVDRMLDAKENVDGKLVASLSNGDTDPIILFNQILTSYCGEQPSLNLPELPLLLKNFIKEGSSLPPHLTSKPTESDALSARASSKCYRACPGKCTCNHKHLIDIQKKELRDLKALKLKIKNEFEEMQSQFQKFFNDIGSQVNEMSTKALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPAFRAESKNVVDFIGEDGSLFILDPSKTLKDGRKLFQFNRIFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTSKDMGINYLALNDLFQMSNERKDNITLRSVKSTTDVLTLMKLGEVNRAVSSTAINNRSSRSHSVLTVHINGKDTSGNSIRSCLHLVDLAGSERVDKSEVTGDRLKEALYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARMNKESSEVMQLKAQVENLKIALANKENSRPMLNRTKEPLTPLEKTPLRLRRLSIENCSTVKTDKPVKAEDKSGAKSPSYIPRSRRLSLEGPRTIKKASADVNKTLQFEPMSQQKYRPQQDPEAMSKLNGQLSNGNSRSDLHVKPPSSPTNMYQKRLIKVDSGVQIHPLKLPQTPEPQLLDKNDSNRIVASDLNDSITTKVIVSTNGKGSQLRRSLRTIGKLINGPDKKSQQINVEVKSPIKSTSHANQIKSPIATTERTTRRRSLTGIQPSGPNNSRRSSLGGVKPVPVAYEKERNARTPPPVHSESKSSKRWL | 988 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre13g03345 | 988 | MobiDBLite | consensus disorder prediction | 913 | 988 | - | - | |
Trre13g03345 | 988 | Pfam | Calponin homology (CH) domain | 25 | 146 | IPR001715 | GO:0005515 | |
Trre13g03345 | 988 | CDD | CH_AtKIN14-like | 25 | 143 | - | - | |
Trre13g03345 | 988 | SMART | ch_5 | 25 | 142 | IPR001715 | GO:0005515 | |
Trre13g03345 | 988 | Gene3D | Kinesin motor domain | 330 | 512 | IPR036961 | - | |
Trre13g03345 | 988 | Coils | Coil | 675 | 702 | - | - | |
Trre13g03345 | 988 | ProSiteProfiles | Kinesin motor domain profile. | 388 | 668 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre13g03345 | 988 | SMART | kinesin_4 | 386 | 676 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre13g03345 | 988 | Gene3D | - | 10 | 176 | IPR036872 | - | |
Trre13g03345 | 988 | Pfam | Microtubule binding | 374 | 510 | IPR031852 | GO:0008017 | |
Trre13g03345 | 988 | Pfam | Kinesin motor domain | 511 | 667 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre13g03345 | 988 | MobiDBLite | consensus disorder prediction | 778 | 823 | - | - | |
Trre13g03345 | 988 | FunFam | Kinesin-like protein KIN-14L | 11 | 173 | - | - | |
Trre13g03345 | 988 | Coils | Coil | 319 | 346 | - | - | |
Trre13g03345 | 988 | SUPERFAMILY | Calponin-homology domain, CH-domain | 25 | 156 | IPR036872 | - | |
Trre13g03345 | 988 | MobiDBLite | consensus disorder prediction | 737 | 823 | - | - | |
Trre13g03345 | 988 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 347 | 667 | IPR027417 | - | |
Trre13g03345 | 988 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 30 | 513 | IPR027640 | GO:0003777|GO:0007018 | |
Trre13g03345 | 988 | Gene3D | Kinesin motor domain | 513 | 709 | IPR036961 | - | |
Trre13g03345 | 988 | PRINTS | Kinesin heavy chain signature | 461 | 482 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre13g03345 | 988 | PRINTS | Kinesin heavy chain signature | 569 | 587 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre13g03345 | 988 | PRINTS | Kinesin heavy chain signature | 539 | 556 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre13g03345 | 988 | PRINTS | Kinesin heavy chain signature | 618 | 639 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Trre13g03345 | 988 | ProSiteProfiles | Calponin homology (CH) domain profile. | 23 | 147 | IPR001715 | GO:0005515 | |
Trre13g03345 | 988 | MobiDBLite | consensus disorder prediction | 913 | 955 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre13g03345 | Trre-Chr13 | 41006072 | 41012619 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre13g03345 | 324 | 668 | Calmodulin-binding Proteins | AT5G65930 | 39.186 | 4.63e-61 | 225 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre13g03345 | K10406 | - | gmx:100786642 | 1398.26 |