Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03175 ATGAACAAATATGCTTTGATGATGAACCCGCTCGCAAGAAGTGTAGAGGAATTGTTGCCTAATCACATTACAAGAACTAATTGGTGTTTCATTCTTATTAGAACAGCACTGGTTATATCTACAGTTGTTGCTGCTTTTCTGATTCCATTTTTCGGGCTAGTGATGGCTTTAATCGGTTCTCTCCTCAGTGTACTTGTGGCAGTTGTATTGCCATCTTTATGTTTTCTGAAAATTGTGGGTAAAAAGGCAACAAGTACACAGGTTACTCTGAGTGTTGTAATTGCTGCATGGGGAATAGTTTGTGCTTCACTTGGAACATATTCATCTCTATTAAAGATTGTGCAGGTGCAGATGAGTGACTGA 363 0.3884 MNKYALMMNPLARSVEELLPNHITRTNWCFILIRTALVISTVVAAFLIPFFGLVMALIGSLLSVLVAVVLPSLCFLKIVGKKATSTQVTLSVVIAAWGIVCASLGTYSSLLKIVQVQMSD 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03175 120 Pfam Transmembrane amino acid transporter protein 1 107 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03175 Trre-Chr13 38312241 38314775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03175 1 120 Amino Acid or Auxin Permease AAAP Family AT5G02180 45.000 8.02e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03175 K15015 - gmx:100790344 163.31