Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03147 ATGTTTATAGTGTTTATGCAGGACTATGGCATTGCCTTTGATGACCATGATCAACCTGTCAAACTGTTTCAGTGCAAATGTTGCAGCAAGTTCAGTAGGAATATGAAGCGATCGAACAGTAGGTTCAATTTCTCACTTATGGATAATGTTTATTCTTTAACTTTTATCCCTAAAATAATGGTACCTAGAAAGGAACTTCAACTTGTTGGCATAAGCTCAATGCTTATAGCATCCAGATATGAGGAGTTATTGGCACCAGAGAACTTGGTTTGTGAAAAGAATGTAATGATAGACATGAGCATATATTCTGCATATGTCAAAGCAATCAAAGCAGCACAGAAGTTCATTTATATTGAGAATCAATATTTTCTCGGTTCATCGTATAATTGGGATTTGTACAAAGACCTCGGTGCAAACAACTTAATTCCAATGGAATTGCGGTAA 444 0.3581 MFIVFMQDYGIAFDDHDQPVKLFQCKCCSKFSRNMKRSNSRFNFSLMDNVYSLTFIPKIMVPRKELQLVGISSMLIASRYEELLAPENLVCEKNVMIDMSIYSAYVKAIKAAQKFIYIENQYFLGSSYNWDLYKDLGANNLIPMELR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03147 147 SUPERFAMILY Cyclin-like 55 88 IPR036915 -
Trre13g03147 147 Gene3D - 56 87 - -
Trre13g03147 147 SUPERFAMILY Phospholipase D/nuclease 100 132 - -
Trre13g03147 147 PANTHER PHOSPHOLIPASE D 82 146 IPR015679 -
Trre13g03147 147 Pfam Cyclin, N-terminal domain 57 87 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03147 Trre-Chr13 37858133 37859929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03147 87 146 Phospholipase D Gene Family (Wang group) AT2G42010 78.333 2.19e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g03147 K01115 - gmx:100786241 113.235