Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g03138 ATGTACATAGGAGAATATGAAAAGAATGTTCGAGACATTTTTCAGAAGGCCAGATCAGCACGTCCATGTGTCATATTCTTTGATGAGCTTGATTCTCTTGCACCAGCTCGGGGAGCTTCCGGAGATTCTGGAGGTGTTTTGGGCAGAGTTGTTTCACAGATGCTTGCAGAAATTGATGGCTTAAGTGATTCAACACAGGATCTATTTATTATAGGTGCAATTAACTCTGATGCATCATACAGAGAGAGGGTATTGAAAGCTCTAACGAGAAAGTTCAAATTGCATGAAGATGTTTCACTTTATGCCATTGCAAAAAAGTGTCCACCAAACTTCACCGGCGCAGACATGTATGCCTTGTGCGCAGATGCTTGGTTCCTCGCGGCAAAGCGCAGGGTTTTGAATGCAGATCCAGAGTCCTCCAACCCAGATAATGAAGTAGATTCTATTGTTGTTGAATATGACGATTTTGTCCAGGTCTTAGAAGAGCTTCAGCCTTCCCTCTCCACGGATGAGCTTAAGAAGTACGAGCTTCTTAGAGATCAGTTTGAAGGCACCTCTAAATGA 564 0.4309 MYIGEYEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVLGRVVSQMLAEIDGLSDSTQDLFIIGAINSDASYRERVLKALTRKFKLHEDVSLYAIAKKCPPNFTGADMYALCADAWFLAAKRRVLNADPESSNPDNEVDSIVVEYDDFVQVLEELQPSLSTDELKKYELLRDQFEGTSK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g03138 187 FunFam Peroxisome biogenesis protein 6 75 161 - -
Trre13g03138 187 PANTHER AAA-FAMILY ATPASE 1 184 - -
Trre13g03138 187 Gene3D - 79 184 - -
Trre13g03138 187 Gene3D - 6 76 IPR027417 -
Trre13g03138 187 Pfam ATPase family associated with various cellular activities (AAA) 2 93 IPR003959 GO:0005524|GO:0016887
Trre13g03138 187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 181 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g03138 Trre-Chr13 37741846 37743214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g03138 2 141 Calmodulin-binding Proteins AT3G56690 30.539 8.35e-13 64.3